RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, human

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR4-213	ENST00000483922	GJB3	O75712	270 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	PRPF6	O94906	941 aa	Known RBP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	GCNT3	O95395	438 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	LDHA	P00338	332 aa	Known RBP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	ABL1	P00519	1130 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	APOD	P05090	189 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	CFI	P05156	583 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	SERPINF2	P08697	491 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	ADH5	P11766	374 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	WAS	P42768	502 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	REST	Q13127	1097 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	HSF5	Q4G112	596 aa	Predicted RBP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	MDH1B	Q5I0G3	518 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	EOGT	Q5NDL2	527 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	C19orf48	Q6RUI8	117 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	C4orf50	Q6ZRC1	276 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	PROSER1	Q86XN7	944 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	TMEM25	Q86YD3	366 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	CBWD2	Q8IUF1	395 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	PNPLA1	Q8N8W4	532 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	P2RY11	Q96G91	374 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	TRIM9	Q9C026	710 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	ZNF518B	Q9C0D4	1074 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	GZF1	Q9H116	711 aa	Predicted RBP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	CHORDC1	Q9UHD1	332 aa	Predicted RBP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	FBXO2	Q9UK22	296 aa	Predicted RBP	13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	GPSM3	Q9Y4H4	160 aa		13.74	□□□□□ -0.21
UBR4-213	ENST00000483922	ADAMTS20	P59510	1910 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	IGHV1OR15-9	A0A0B4J2B8	117 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	COCH	O43405	550 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	SH3BP5	O60239	455 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	GREM1	O60565	184 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	TULP3	O75386	442 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	RPL6	Q02878	288 aa	Known RBP	13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	ZNF33A	Q06730	810 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	DUOXA1	Q1HG43	343 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	PAQR9	Q6ZVX9	377 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	BBS7	Q8IWZ6	715 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	PGBD3	Q8N328	593 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	MINDY1	Q8N5J2	469 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	HPS3	Q969F9	1004 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	SPACA7	Q96KW9	195 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	CEP295NL	Q96MC4	621 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	CLIC6	Q96NY7	704 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	KCNK16	Q96T55	309 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	B3GNT5	Q9BYG0	378 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	SLC6A17	Q9H1V8	727 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	OLFML3	Q9NRN5	406 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	DNAAF2	Q9NVR5	837 aa	Known RBP	13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	CALCOCO1	Q9P1Z2	691 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	SEL1L	Q9UBV2	794 aa		13.73	□□□□□ -0.21
UBR4-213	ENST00000483922	CEP192	Q8TEP8	1941 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	PLXNB3	Q9ULL4	1909 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	MYO18A	Q92614	2054 aa	Known RBP	13.72	□□□□□ -0.21
UBR4-213	ENST00000483922		H3BQV1	296 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	ARHGAP33	O14559	1287 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	TMEM191B	P0C7N4	346 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	PTPN1	P18031	435 aa	Known RBP	13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	GNL1	P36915	607 aa	Predicted RBP	13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	PDE6C	P51160	858 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	SCAP	Q12770	1279 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	TRAPPC11	Q7Z392	1133 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	GPD1L	Q8N335	351 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	RASSF8	Q8NHQ8	419 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	SCAMP5	Q8TAC9	235 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	NOC3L	Q8WTT2	800 aa	Known RBP	13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	ZNF516	Q92618	1163 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	CCSER2	Q9H7U1	834 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	IL37	Q9NZH6	218 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	EXOC7	Q9UPT5	735 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	STARD13	Q9Y3M8	1113 aa		13.72	□□□□□ -0.21
UBR4-213	ENST00000483922	E2F8	A0AVK6	867 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	TBC1D3B	A6NDS4	549 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	PRRT4	C9JH25	899 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	SLC9A3R1	O14745	358 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	TRIM66	O15016	1216 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	TACC1	O75410	805 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	ADH1C	P00326	375 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	MBL2	P11226	248 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	GAP43	P17677	238 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	NDUFV2	P19404	249 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	ANXA13	P27216	316 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	MAOB	P27338	520 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	HOXD12	P35452	270 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	PPP3CC	P48454	512 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	GAD2	Q05329	585 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	GFPT1	Q06210	699 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	IFRD2	Q12894	506 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	MYO1E	Q12965	1108 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	DUOXA2	Q1HG44	320 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	C8orf34	Q49A92	452 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	TDRD10	Q5VZ19	366 aa	Known RBP	13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	EGFLAM	Q63HQ2	1017 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	SV2B	Q7L1I2	683 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	HS2ST1	Q7LGA3	356 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	SLCO6A1	Q86UG4	719 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	SYCP3	Q8IZU3	236 aa		13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.71	□□□□□ -0.21
UBR4-213	ENST00000483922	CEP76	Q8TAP6	659 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms