RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CACNA2D1P54289 1103 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 BCAT1P54687 386 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 HDAC4P56524 1084 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 BYSLQ13895 437 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 TAZQ16635 292 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 KCTD16Q68DU8 428 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 UBLCP1Q8WVY7 318 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 LINC01599Q8WXQ3 324 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 KCNK16Q96T55 309 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 HNRNPABQ99729 332 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 RTP3Q9BQQ7 232 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 TMEM121Q9BTD3 319 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 SEMA4AQ9H3S1 761 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 STARD7Q9NQZ5 370 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 LCMT1Q9UIC8 334 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 KBTBD13C9JR72 458 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 SETSIPP0DME0 302 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 KLRC2P26717 231 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 PTPN7P35236 360 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 PCK1P35558 622 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 CHKAP35790 457 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 BRCC3P46736 316 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 NRLP54845 237 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 COPS2P61201 443 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZNF844Q08AG5 666 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 PTK6Q13882 451 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 GPNMBQ14956 572 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 OASLQ15646 514 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 CA9Q16790 459 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZC3H12AQ5D1E8 599 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 MDH1BQ5I0G3 518 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 RHBDF2Q6PJF5 856 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 CLEC20AQ6ZU45 233 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 B4GALNT4Q76KP1 1039 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 SH2D3CQ8N5H7 860 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC43A3Q8NBI5 491 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 KCTD6Q8NC69 237 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 FAM172AQ8WUF8 416 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 MAIP1Q8WWC4 291 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 PCED1BQ96HM7 432 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 TNIP3Q96KP6 325 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 C11orf84Q9BUA3 381 aaPredicted RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 DUSP16Q9BY84 665 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 RHOBTB2Q9BYZ6 727 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 NGRNQ9NPE2 291 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 ASNSD1Q9NWL6 643 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 GPATCH2LQ9NWQ4 482 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 DDX56Q9NY93 547 aaKnown RBP9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 ASIC3Q9UHC3 531 aa9.26□□□□□ -0.93
CDC42SE1-204ENST00000483763 ENDOD1O94919 500 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 SHBGP04278 402 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 PECAM1P16284 738 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ARSEP51690 589 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 GDF10P55107 478 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 PITX1P78337 314 aaPredicted RBP9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ADCY1Q08828 1119 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ADIGQ0VDE8 80 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ACAP1Q15027 740 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 HADHQ16836 314 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ODF2Q5BJF6 829 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 SCYL2Q6P3W7 929 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ECHDC2Q86YB7 292 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 HACE1Q8IYU2 909 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ACTL9Q8TC94 416 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 LRRC45Q96CN5 670 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 RUNDC3BQ96NL0 473 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 TSEN34Q9BSV6 310 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 CALN1Q9BXU9 219 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 ADAM7Q9H2U9 754 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 DNAJC17Q9NVM6 304 aaKnown RBP9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 WDR70Q9NW82 654 aa9.25□□□□□ -0.93
CDC42SE1-204ENST00000483763 RPLP2P05387 115 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 NPR3P17342 541 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 SDC4P31431 198 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 ADCY8P40145 1251 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 ITGA8P53708 1063 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 MAP3K7CLP57077 242 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 OTUD4Q01804 1114 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 MLLT1Q03111 559 aaPredicted RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 DPYSL3Q14195 570 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 CEP85LQ5SZL2 805 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC26A9Q7LBE3 791 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 GPRIN1Q7Z2K8 1008 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZNF280BQ86YH2 543 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC35B2Q8TB61 432 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 HOMER3Q9NSC5 361 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 ZNF148Q9UQR1 794 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 C9IYK1 514 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 DPYSL4O14531 572 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 XPO1O14980 1071 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 GAS8O95995 478 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 RPL9P32969 192 aaKnown RBP9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 PMS2P54278 862 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 CDH6P55285 790 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 PPARDQ03181 441 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC20A2Q08357 652 aa9.24□□□□□ -0.93
CDC42SE1-204ENST00000483763 SLC29A2Q14542 456 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms