RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 HIBCHQ6NVY1 386 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-225ENST00000483495 PIGZQ86VD9 579 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 RELL1Q8IUW5 271 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 SLC43A3Q8NBI5 491 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 C3orf58Q8NDZ4 430 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 CLEC4CQ8WTT0 213 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 GLT1D1Q96MS3 346 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 ADAM2Q99965 735 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 TMEM109Q9BVC6 243 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 FOXP3Q9BZS1 431 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.85□□□□□ -0.19
CPNE1-225ENST00000483495 CACNG4Q9UBN1 327 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 NOD1Q9Y239 953 aa13.85□□□□□ -0.19
CPNE1-225ENST00000483495 SHOX2O60902 331 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 ACAT1P24752 427 aaKnown RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 LMAN1P49257 510 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CDH6P55285 790 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 HDAC4P56524 1084 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 SLC8A3P57103 927 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 ATP11AP98196 1134 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CDO1Q16878 200 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 EFHC1Q5JVL4 640 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 IZUMO3Q5VZ72 239 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 KCTD16Q68DU8 428 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 LHX8Q68G74 356 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 TRAF7Q6Q0C0 670 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 ZNF598Q86UK7 904 aaKnown RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 MAP7D3Q8IWC1 876 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 SH2D3CQ8N5H7 860 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 GLIS1Q8NBF1 620 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 HAUS1Q96CS2 278 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 DDX23Q9BUQ8 820 aaKnown RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 ADAM7Q9H2U9 754 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 PCDH9Q9HC56 1237 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CRTAC1Q9NQ79 661 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 DDX43Q9NXZ2 648 aaKnown RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 DNALI1O14645 258 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 LCP1P13796 627 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 IL4RP24394 825 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CHKAP35790 457 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 MAP2K2P36507 400 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 VPS41P49754 854 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 DYNLT1P63172 113 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 ADCY1Q08828 1119 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 GRIK3Q13003 919 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 SLC29A2Q14542 456 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 KDM7AQ6ZMT4 941 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 RFX6Q8HWS3 928 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CALN1Q9BXU9 219 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 NGRNQ9NPE2 291 aaKnown RBP13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CDH9Q9ULB4 789 aa13.84□□□□□ -0.19
CPNE1-225ENST00000483495 CASTOR2A6NHX0 329 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 NDC80O14777 642 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 SHBGP04278 402 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 CKBP12277 381 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 IFFO1Q0D2I5 559 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 TFDP2Q14188 446 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 CCDC142Q17RM4 750 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 P3H1Q32P28 736 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 TIGD5Q53EQ6 642 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 MDH1BQ5I0G3 518 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 CD300LGQ6UXG3 332 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 DSTYKQ6XUX3 929 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 CLEC20AQ6ZU45 233 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 ZNF771Q7L3S4 317 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-225ENST00000483495 CROCCP2Q86T23 111 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 PRUNE1Q86TP1 453 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 HOOK3Q86VS8 718 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 ECHDC2Q86YB7 292 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 ZCCHC9Q8N567 271 aaKnown RBP13.83□□□□□ -0.2
CPNE1-225ENST00000483495 FAF2Q96CS3 445 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 RNF157Q96PX1 679 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 SYT15Q9BQS2 421 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 PAAF1Q9BRP4 392 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 TMEM121Q9BTD3 319 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 ADAM33Q9BZ11 813 aa13.83□□□□□ -0.2
CPNE1-225ENST00000483495 CDC42EP4Q9H3Q1 356 aaKnown RBP13.83□□□□□ -0.2
CPNE1-225ENST00000483495 SAE1Q9UBE0 346 aaPredicted RBP13.83□□□□□ -0.2
CPNE1-225ENST00000483495 A6NNZ2 444 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 CLDN5O00501 218 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 BEST1O76090 585 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 CYP11A1P05108 521 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 INHAP05111 366 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 FAM200BP0CF97 657 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 ZSCAN5DPP0CG00 497 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TFE3P19532 575 aaPredicted RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 NR1D1P20393 614 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 MATKP42679 507 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 APLP1P51693 650 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 MRPS5P82675 430 aaKnown RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 MMRN1Q13201 1228 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TUSC3Q13454 348 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 KRT71Q3SY84 523 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 TUBB8Q3ZCM7 444 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 UBAP2Q5T6F2 1119 aaKnown RBP13.82□□□□□ -0.2
CPNE1-225ENST00000483495 CEP128Q6ZU80 1094 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 STRADAQ7RTN6 431 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 UROC1Q96N76 676 aa13.82□□□□□ -0.2
CPNE1-225ENST00000483495 ZNF670Q9BS34 389 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms