RNA–Protein interactions for RNA: ENST00000483443.1

LRRFIP1-212, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 1,069 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-212ENST00000483443 CEP295Q9C0D2 2601 aa13.68□□□□□ -0.22
LRRFIP1-212ENST00000483443 HELZP42694 1942 aaKnown RBP13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 TCRBV21S2A2A0A5A6 115 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 TBC1D3BA6NDS4 549 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 C1QTNF9BB2RNN3 333 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 SGK1O00141 431 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 CDX4O14627 284 aaPredicted RBP13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 AP5Z1O43299 807 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 C1QTNF9P0C862 333 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 ASIC1P78348 528 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 IRX4P78413 519 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 CUL4AQ13619 759 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 PSMD6Q15008 389 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 SLC39A14Q15043 492 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 ARMCX6Q7L4S7 300 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 RABEPKQ7Z6M1 372 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 TMEFF1Q8IYR6 380 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 NUP93Q8N1F7 819 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 RDH13Q8NBN7 331 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 KCNV2Q8TDN2 545 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 RLN3Q8WXF3 142 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 MRPL45Q9BRJ2 306 aaKnown RBP13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 NACA2Q9H009 215 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 ZSCAN16Q9H4T2 348 aaPredicted RBP13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 ZMIZ1Q9ULJ6 1067 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 FRYQ5TBA9 3013 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 KIAA1549LQ6ZVL6 1849 aa13.67□□□□□ -0.22
LRRFIP1-212ENST00000483443 UBE4BO95155 1302 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 A0A087X0B3 334 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 SCAMP3O14828 347 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 PHACTR2O75167 634 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 STAU1O95793 577 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 ATICP31939 592 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 RDXP35241 583 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 KIR2DL1P43626 348 aaPredicted RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 MAPK8P45983 427 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 SLC6A11P48066 632 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 CYP2J2P51589 502 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 SNRPFP62306 86 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 CYP24A1Q07973 514 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 STK38Q15208 465 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 FAM26FQ5R3K3 315 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 LY6G5CQ5SRR4 150 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 HECTD3Q5T447 861 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 FAM173BQ6P4H8 233 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 RHBDF2Q6PJF5 856 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 SLC36A4Q6YBV0 504 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 C12orf40Q86WS4 652 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 HDDC3Q8N4P3 179 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 ZNF513Q8N8E2 541 aaPredicted RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 XXYLT1Q8NBI6 393 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 DEFB124Q8NES8 71 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 CEP76Q8TAP6 659 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 CCDC127Q96BQ5 260 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 USP28Q96RU2 1077 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 MED10Q9BTT4 135 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 TRIM9Q9C026 710 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 ZNF518BQ9C0D4 1074 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 AGPAT3Q9NRZ7 376 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 DEC1Q9P2X7 70 aa13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 NXF1Q9UBU9 619 aaKnown RBP13.66□□□□□ -0.22
LRRFIP1-212ENST00000483443 ANAPC1Q9H1A4 1944 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 A0A0A0MRY4 1105 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 HOXC11O43248 304 aaPredicted RBP13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 COCHO43405 550 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 CST3P01034 146 aaPredicted RBP13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 CFIP05156 583 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 ENGP17813 658 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 TRIM21P19474 475 aaKnown RBP13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 SYT1P21579 422 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 PTGER3P43115 390 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 TUBP50607 506 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 ANO4Q32M45 955 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 SLC23A3Q6PIS1 610 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 KDF1Q8NAX2 398 aaPredicted RBP13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 GLIS3Q8NEA6 775 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 HPS3Q969F9 1004 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 SCNM1Q9BWG6 230 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 DPEP3Q9H4B8 488 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 DMAP1Q9NPF5 467 aaPredicted RBP13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 CGNQ9P2M7 1197 aaKnown RBP13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 CHD6Q8TD26 2715 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 MYO16Q9Y6X6 1858 aa13.65□□□□□ -0.22
LRRFIP1-212ENST00000483443 CLDN5O00501 218 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 HOXB2P14652 356 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 HNRNPLP14866 589 aaKnown RBP eCLIP13.64□□□□□ -0.231e-8■□□□□ 10.1
LRRFIP1-212ENST00000483443 SPINK2P20155 84 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 SLC5A3P53794 718 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 CACNA2D1P54289 1103 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 RPL6Q02878 288 aaKnown RBP13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 GFPT1Q06210 699 aaPredicted RBP13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 GOLGA8FQ08AF8 430 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 GOLGA8DPQ0D2H9 430 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 BIRC3Q13489 604 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 DUOXA1Q1HG43 343 aa13.64□□□□□ -0.23
LRRFIP1-212ENST00000483443 ZNF699Q32M78 642 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms