RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 NECTIN4Q96NY8 510 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 SLITRK1Q96PX8 696 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 CPXM1Q96SM3 734 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 FBXO44Q9H4M3 255 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 EHD2Q9NZN4 543 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 GMIPQ9P107 970 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 OBSL1O75147 1896 aa18.78■□□□□ 0.6
CPNE1-224ENST00000483359 PGFP49763 221 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 NOMO3P69849 1222 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 PTPN20Q4JDL3 420 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 LEMD2Q8NC56 503 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 SLC30A5Q8TAD4 765 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 KCTD13Q8WZ19 329 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 PPP1R13BQ96KQ4 1090 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 NOX5Q96PH1 765 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 UBXN6Q9BZV1 441 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 SLITRK6Q9H5Y7 841 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 SYNCQ9H7C4 482 aa18.77■□□□□ 0.6
CPNE1-224ENST00000483359 MOSPD3O75425 235 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 F11P03951 625 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 SERPING1P05155 500 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 TNFAIP3P21580 790 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 CDC25CP30307 473 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 GBP2P32456 591 aaPredicted RBP18.77■□□□□ 0.59
CPNE1-224ENST00000483359 SMAD2Q15796 467 aaKnown RBP18.77■□□□□ 0.59
CPNE1-224ENST00000483359 TSR1Q2NL82 804 aaKnown RBP18.77■□□□□ 0.59
CPNE1-224ENST00000483359 WDR59Q6PJI9 974 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 TC2NQ8N9U0 490 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 ST13P5Q8NFI4 369 aaPredicted RBP18.77■□□□□ 0.59
CPNE1-224ENST00000483359 OLIG1Q8TAK6 271 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 HSFY1Q96LI6 401 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 SYT11Q9BT88 431 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.77■□□□□ 0.59
CPNE1-224ENST00000483359 TRPC7Q9HCX4 862 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 ARHGAP20Q9P2F6 1191 aa18.77■□□□□ 0.59
CPNE1-224ENST00000483359 TMCO5BA8MYB1 307 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 ZNF197O14709 1029 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 LSM8O95777 96 aaKnown RBP18.76■□□□□ 0.59
CPNE1-224ENST00000483359 ZBED1O96006 694 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 CYP1A1P04798 512 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-224ENST00000483359 MRE11P49959 708 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.76■□□□□ 0.59
CPNE1-224ENST00000483359 SCUBE3Q8IX30 993 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 ZNHIT6Q9NWK9 470 aaKnown RBP18.76■□□□□ 0.59
CPNE1-224ENST00000483359 IL37Q9NZH6 218 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 TRPM5Q9NZQ8 1165 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 USP3Q9Y6I4 520 aa18.76■□□□□ 0.59
CPNE1-224ENST00000483359 ERBB2P04626 1255 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 CDH5P33151 784 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 AAK1Q2M2I8 961 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 TXNDC8Q6A555 127 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 DNAAF5Q86Y56 855 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 NPAS3Q8IXF0 933 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 IPO4Q8TEX9 1081 aaKnown RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 FGF13Q92913 245 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 MCRS1Q96EZ8 462 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 RPGRIP1Q96KN7 1286 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 SLC4A5Q9BY07 1137 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 SCML2Q9UQR0 700 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 A0A1W2PQH9 124 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 FAM92AA1XBS5 289 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 C2orf78A6NCI8 922 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 UNGP13051 313 aaPredicted RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 HNRNPH3P31942 346 aaKnown RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 NSFP46459 744 aaKnown RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 CLEC16AQ2KHT3 1053 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 GPR158Q5T848 1215 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 POTEHQ6S545 545 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 TRIM72Q6ZMU5 477 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 CCDC186Q7Z3E2 898 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 STK32AQ8WU08 396 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 MRPS31Q92665 395 aaKnown RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 PIWIL1Q96J94 861 aaKnown RBP18.75■□□□□ 0.59
CPNE1-224ENST00000483359 MYADMQ96S97 322 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 C11orf70Q9BRQ4 267 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 NMUR1Q9HB89 426 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 TAS2R14Q9NYV8 317 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 ADAMTS1Q9UHI8 967 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 NAGPAQ9UK23 515 aa18.75■□□□□ 0.59
CPNE1-224ENST00000483359 ZNF840PA6NDX5 716 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 DDX3XO00571 662 aaKnown RBP eCLIP18.74■□□□□ 0.591e-13■■■□□ 15.3
CPNE1-224ENST00000483359 PAPSS1O43252 624 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-224ENST00000483359 FGF19O95750 216 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 ACADSBP45954 432 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 MRPS5P82675 430 aaKnown RBP18.74■□□□□ 0.59
CPNE1-224ENST00000483359 ARID5BQ14865 1188 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 PUS10Q3MIT2 529 aaKnown RBP18.74■□□□□ 0.59
CPNE1-224ENST00000483359 MMS22LQ6ZRQ5 1243 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 ERICH1Q86X53 443 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 MAB21L3Q8N8X9 362 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 CHP1Q99653 195 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 AVENQ9NQS1 362 aaPredicted RBP18.74■□□□□ 0.59
CPNE1-224ENST00000483359 CNGB3Q9NQW8 809 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 COMMD8Q9NX08 183 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 OSER1Q9NX31 292 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 FAM50BQ9Y247 325 aa18.74■□□□□ 0.59
CPNE1-224ENST00000483359 BZW2Q9Y6E2 419 aaKnown RBP18.74■□□□□ 0.59
CPNE1-224ENST00000483359 YJEFN3A6XGL0 299 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 E7ENQ6 273 aa18.73■□□□□ 0.59
CPNE1-224ENST00000483359 DAOAP59103 153 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms