RNA–Protein interactions for RNA: ENST00000482470.5

CALD1-220, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 3,941 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-220ENST00000482470 KBTBD12Q3ZCT8 623 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 PDZD4Q76G19 769 aaPredicted RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 MTDHQ86UE4 582 aaKnown RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 CRLF3Q8IUI8 442 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 HACE1Q8IYU2 909 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 DCLK2Q8N568 766 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 SMC1BQ8NDV3 1235 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 CKAP2Q8WWK9 683 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 TWNKQ96RR1 684 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 LPIN3Q9BQK8 851 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 NIFKQ9BYG3 293 aaKnown RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 SHCBP1LQ9BZQ2 653 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 CPA4Q9UI42 421 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 CPSF3Q9UKF6 684 aaKnown RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 CFAP73A6NFT4 308 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 PDHXO00330 501 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 NQO1P15559 274 aaKnown RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 BGNP21810 368 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 AMPD1P23109 780 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 TYK2P29597 1187 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 EPHX2P34913 555 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 FAAP100Q0VG06 881 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 DPYSL3Q14195 570 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 ZNF268Q14587 947 aaPredicted RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 CES3Q6UWW8 571 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 FAM183BPQ6ZVS7 135 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 LONP2Q86WA8 852 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 ARID3BQ8IVW6 561 aaPredicted RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 NUDCD1Q96RS6 583 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 ELOVL4Q9GZR5 314 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 NOP53Q9NZM5 478 aaKnown RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.52□□□□□ -0.89
CALD1-220ENST00000482470 SHOC2Q9UQ13 582 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 FNDC3AQ9Y2H6 1198 aaKnown RBP9.52□□□□□ -0.89
CALD1-220ENST00000482470 LAMB1P07942 1786 aa9.52□□□□□ -0.89
CALD1-220ENST00000482470 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 CXCL11O14625 94 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 ALDH18A1P54886 795 aaKnown RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 NLRP9Q7RTR0 991 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 CCDC125Q86Z20 511 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 CDKL3Q8IVW4 592 aaPredicted RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 SCN4BQ8IWT1 228 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SLC7A14Q8TBB6 771 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 PCYT2Q99447 389 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 R3HDMLQ9H3Y0 253 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 HEY2Q9UBP5 337 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 NR2E3Q9Y5X4 410 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 M0QYT0 321 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 TXNDC9O14530 226 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 ENO1P06733 434 aaKnown RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 CDKN2BP42772 138 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SLC26A2P50443 739 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SEPT6Q14141 434 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 CYP1B1Q16678 543 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 TSNAXIP1Q2TAA8 658 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SPDYCQ5MJ68 293 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 ARHGAP24Q8N264 748 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 RIBC1Q8N443 379 aaPredicted RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 NDRG1Q92597 394 aaKnown RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 SPC25Q9HBM1 224 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 TNFSF13BQ9Y275 285 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 PPP2R3BQ9Y5P8 575 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 KCNK1O00180 336 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 GRIN3BO60391 1043 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 PDHA1P08559 390 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 IL1R2P27930 398 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 CA8P35219 290 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 RAD23BP54727 409 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SLC12A2P55011 1212 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 EFHC2Q5JST6 749 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 PPP1R26Q5T8A7 1209 aaPredicted RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 NOTUMQ6P988 496 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SLC2A14Q8TDB8 520 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 C18orf25Q96B23 403 aaPredicted RBP9.51□□□□□ -0.89
CALD1-220ENST00000482470 CENPTQ96BT3 561 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 CYP4F11Q9HBI6 524 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 GOLGA2P5Q9HBQ8 144 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 ZFATQ9P243 1243 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 STAP1Q9ULZ2 295 aa9.51□□□□□ -0.89
CALD1-220ENST00000482470 SLC4A1P02730 911 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 EDN1P05305 212 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 SNRPAP09012 282 aaKnown RBP9.5□□□□□ -0.89
CALD1-220ENST00000482470 MCF2P10911 925 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 CYP2F1P24903 491 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 EPHB1P54762 984 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 DEUP1Q05D60 604 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 ATG16L1Q676U5 607 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 HASPINQ8TF76 798 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 TNIP3Q96KP6 325 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 FAM161BQ96MY7 647 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 UBP1Q9NZI7 540 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 AP4E1Q9UPM8 1137 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 CNTNAP2Q9UHC6 1331 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 APOC4-APOC2K7ER74 178 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 FZD9O00144 591 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 PMM2O15305 246 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 USP12O75317 370 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 RECQL4O94761 1208 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 APOC2P02655 101 aa9.5□□□□□ -0.89
CALD1-220ENST00000482470 HOXC6P09630 235 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms