RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PGFP49763 221 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 GALK1P51570 392 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 NRLP54845 237 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 SEC13P55735 322 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 SLC7A9P82251 487 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 INCA1Q0VD86 236 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 EDRF1Q3B7T1 1238 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 ZNF658Q5TYW1 1059 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-212ENST00000482251 CCDC150Q8NCX0 1101 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 PDZD8Q8NEN9 1154 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 RPLP0P6Q8NHW5 317 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 CD101Q93033 1021 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 HHIPQ96QV1 700 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 TSG101Q99816 390 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 NT5C1AQ9BXI3 368 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 FAM126AQ9BYI3 521 aaPredicted RBP11.09□□□□□ -0.63
CPSF4-212ENST00000482251 NACA2Q9H009 215 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 PCDHA5Q9Y5H7 936 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 DMXL1Q9Y485 3027 aa11.09□□□□□ -0.63
CPSF4-212ENST00000482251 SPTBN4Q9H254 2564 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 CILPO75339 1184 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 SMC2O95347 1197 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 PPP3CCP48454 512 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 AMPD2Q01433 879 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 KDSRQ06136 332 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 SIM2Q14190 667 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-212ENST00000482251 CBWD6Q4V339 395 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 CBWD3Q5JTY5 395 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 CBWD5Q5RIA9 395 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 HECTD3Q5T447 861 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 KRT39Q6A163 491 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 CLEC20AQ6ZU45 233 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.08□□□□□ -0.64
CPSF4-212ENST00000482251 UNC93AQ86WB7 457 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 C12orf40Q86WS4 652 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 SFTPA1Q8IWL2 248 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 SYNPOQ8N3V7 929 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 WHAMMQ8TF30 809 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 WBP2Q969T9 261 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 RMDN1Q96DB5 314 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 ZFRQ96KR1 1074 aaKnown RBP11.08□□□□□ -0.64
CPSF4-212ENST00000482251 GSDMAQ96QA5 445 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 GMEB2Q9UKD1 530 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 MAN1B1Q9UKM7 699 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 RAB23Q9ULC3 237 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 USP18Q9UMW8 372 aa11.08□□□□□ -0.64
CPSF4-212ENST00000482251 BIN1O00499 593 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 MDM4O15151 490 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 HRO43593 1189 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 GADD45BO75293 160 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 PAPSS2O95340 614 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 TCF3P15923 654 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 CD44P16070 742 aaKnown RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 PFKLP17858 780 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 TRIM21P19474 475 aaKnown RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 ACO1P21399 889 aaKnown RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 DRD1P21728 446 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 OPRD1P41143 372 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 ID4P47928 161 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 MESP2Q0VG99 397 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 NR1H3Q13133 447 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 GAB4Q2WGN9 574 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 PPP1R26Q5T8A7 1209 aaPredicted RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 KLHL10Q6JEL2 608 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 CEP68Q76N32 757 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 LONP2Q86WA8 852 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 FBXL13Q8NEE6 735 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 OVCA2Q8WZ82 227 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 SECISBP2LQ93073 1101 aaKnown RBP11.07□□□□□ -0.64
CPSF4-212ENST00000482251 TATDN2Q93075 761 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 CYFIP2Q96F07 1278 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 CYP3A43Q9HB55 503 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 CSNK1G1Q9HCP0 422 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 ZDHHC4Q9NPG8 344 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 RAB20Q9NX57 234 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 NUDT5Q9UKK9 219 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 SLC8A2Q9UPR5 921 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 CTNND2Q9UQB3 1225 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 SH3BP1Q9Y3L3 701 aa11.07□□□□□ -0.64
CPSF4-212ENST00000482251 HHLA1C9JL84 531 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 SLC16A3O15427 465 aaKnown RBP11.06□□□□□ -0.64
CPSF4-212ENST00000482251 TLR5O60602 858 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 TBX18O95935 607 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 GTF2H1P32780 548 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 SLC6A11P48066 632 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 SPEM2Q0P670 501 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 LRMPQ12912 555 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 DHCR24Q15392 516 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 C2orf27AQ580R0 203 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 DDX42Q86XP3 938 aaKnown RBP eCLIP11.06□□□□□ -0.64
CPSF4-212ENST00000482251 BBS7Q8IWZ6 715 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 HEXIM2Q96MH2 286 aaKnown RBP11.06□□□□□ -0.64
CPSF4-212ENST00000482251 HNRNPABQ99729 332 aaKnown RBP11.06□□□□□ -0.64
CPSF4-212ENST00000482251 FBXO44Q9H4M3 255 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 PARD6AQ9NPB6 346 aa11.06□□□□□ -0.64
CPSF4-212ENST00000482251 TLR8Q9NR97 1041 aaKnown RBP11.06□□□□□ -0.64
CPSF4-212ENST00000482251 CISHQ9NSE2 258 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms