RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TGM1P22735 817 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 EPHA3P29320 983 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 HTR7P34969 479 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 SERPINF1P36955 418 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 GATMP50440 423 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 CLCN2P51788 898 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 ANO1Q5XXA6 986 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 ARL6IP4Q66PJ3 421 aaKnown RBP6.73□□□□□ -1.33
SF3B1-210ENST00000482158 TLDC1Q6P9B6 456 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 CRIP3Q6Q6R5 217 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 Q6YL49 198 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 ATG16L2Q8NAA4 619 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 FAM71BQ8TC56 605 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 ATRIPQ8WXE1 791 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 TFAP2BQ92481 460 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 FBXL20Q96IG2 436 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 HIST1H2AAQ96QV6 131 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 HAPLN3Q96S86 360 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 RMDN3Q96TC7 470 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 HERPUD2Q9BSE4 406 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 VN1R3Q9BXE9 311 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 ZNF341Q9BYN7 854 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 GRHPRQ9UBQ7 328 aa6.73□□□□□ -1.33
SF3B1-210ENST00000482158 DRG1Q9Y295 367 aaKnown RBP6.73□□□□□ -1.33
SF3B1-210ENST00000482158 EPN1Q9Y6I3 576 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-210ENST00000482158 MORC2Q9Y6X9 1032 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-210ENST00000482158 COL15A1P39059 1388 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 SYT5O00445 386 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 DHHO43323 396 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 PEX1O43933 1283 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 TNFRSF6BO95407 300 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 FESP07332 822 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 ITGA5P08648 1049 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 IL6RP08887 468 aaPredicted RBP6.72□□□□□ -1.33
SF3B1-210ENST00000482158 TNFRSF1AP19438 455 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 MAKP20794 623 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 MPLP40238 635 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 BLOC1S1P78537 153 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 GRM1Q13255 1194 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 ATP1A4Q13733 1029 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 TREML2Q5T2D2 321 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 ZNF627Q7L945 461 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 SLC44A3Q8N4M1 653 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 MYCT1Q8N699 235 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 METTL25Q8N6Q8 603 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 OR1N1Q8NGS0 311 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 MBD3L2Q8NHZ7 208 aaPredicted RBP6.72□□□□□ -1.33
SF3B1-210ENST00000482158 LARP4BQ92615 738 aaKnown RBP6.72□□□□□ -1.33
SF3B1-210ENST00000482158 R3HDM4Q96D70 268 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 GLOD4Q9HC38 313 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 MYRFQ9Y2G1 1151 aa6.72□□□□□ -1.33
SF3B1-210ENST00000482158 ACKR2O00590 384 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 PCDH17O14917 1159 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 CBFA2T3O75081 653 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 ZNF202O95125 648 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 ADRA1BP35368 520 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 GRK6P43250 576 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 NSUN2Q08J23 767 aaKnown RBP eCLIP6.71□□□□□ -1.34
SF3B1-210ENST00000482158 FOXI1Q12951 378 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 GPS1Q13098 491 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 LIN54Q6MZP7 749 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 CAND1Q86VP6 1230 aaKnown RBP6.71□□□□□ -1.34
SF3B1-210ENST00000482158 Q8N1X5 172 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 LCORLQ8N3X6 602 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 BEND2Q8NDZ0 799 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 SUN3Q8TAQ9 357 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 PBKQ96KB5 322 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 COQ10AQ96MF6 247 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 WDR24Q96S15 920 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 ALG8Q9BVK2 526 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 INO80BQ9C086 356 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-210ENST00000482158 MAGEH1Q9H213 219 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 AGO4Q9HCK5 861 aaKnown RBP6.71□□□□□ -1.34
SF3B1-210ENST00000482158 EHD3Q9NZN3 535 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 SLC27A6Q9Y2P4 619 aa6.71□□□□□ -1.34
SF3B1-210ENST00000482158 TRIM38O00635 465 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 ASNA1O43681 348 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 ELFN1P0C7U0 828 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 HKR1P10072 659 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 NPPBP16860 134 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 KRT4P19013 534 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 SEC24CP53992 1094 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 PDCD2Q16342 344 aaPredicted RBP6.7□□□□□ -1.34
SF3B1-210ENST00000482158 ZNF618Q5T7W0 954 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 CLEC9AQ6UXN8 241 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 ULK2Q8IYT8 1036 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 C11orf44Q8N8P7 122 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 ANKRD42Q8N9B4 389 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 SUPT20HQ8NEM7 779 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 CTHRC1Q96CG8 243 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 EID2BQ96D98 161 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 POLR3GLQ9BT43 218 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 DACT1Q9NYF0 836 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 TMOD4Q9NZQ9 345 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 LRFN1Q9P244 771 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 CA14Q9ULX7 337 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 USP22Q9UPT9 525 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 PCDHGB3Q9Y5G1 929 aa6.7□□□□□ -1.34
SF3B1-210ENST00000482158 hCG_1642624A0A1W2PR95 340 aa6.69□□□□□ -1.34
SF3B1-210ENST00000482158 CCNT2O60583 730 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms