RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ATF6P18850 670 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 FECHP22830 423 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 CDH5P33151 784 aaPredicted RBP12.2□□□□□ -0.46
HPS4-212ENST00000481910 PLA2G4AP47712 749 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 RGS7P49802 495 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 EPHB3P54753 998 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 NOMO3P69849 1222 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 GFPT1Q06210 699 aaPredicted RBP12.2□□□□□ -0.46
HPS4-212ENST00000481910 KCNC3Q14003 757 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 PPM1LQ5SGD2 360 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 RTL10Q7L3V2 364 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 EFHBQ8N7U6 833 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 OLIG1Q8TAK6 271 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 GIPC2Q8TF65 315 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 HDAC7Q8WUI4 952 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 MYLIPQ8WY64 445 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 NOX5Q96PH1 765 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 UBXN6Q9BZV1 441 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 ETAA1Q9NY74 926 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 CYTH4Q9UIA0 394 aa12.2□□□□□ -0.46
HPS4-212ENST00000481910 SOWAHDA6NJG2 315 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 UNGP13051 313 aaPredicted RBP12.19□□□□□ -0.46
HPS4-212ENST00000481910 NSFP46459 744 aaKnown RBP12.19□□□□□ -0.46
HPS4-212ENST00000481910 KIF11P52732 1056 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 SLC18A3Q16572 532 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 CLEC16AQ2KHT3 1053 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 ASTE1Q2TB18 679 aaPredicted RBP12.19□□□□□ -0.46
HPS4-212ENST00000481910 ALKBH5Q6P6C2 394 aaKnown RBP12.19□□□□□ -0.46
HPS4-212ENST00000481910 ERICH1Q86X53 443 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 TMEM139Q8IV31 216 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 CCDC170Q8IYT3 715 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 STKLD1Q8NE28 680 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 VN1R2Q8NFZ6 395 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 STK32AQ8WU08 396 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 SPATA17Q96L03 361 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 LRRC4Q9HBW1 653 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 PNPLA8Q9NP80 782 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 HHLA1C9JL84 531 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 PIK3R2O00459 728 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 LINC01565O15544 149 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 RFPL2O75678 378 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 SRGAP2BP0DMP2 458 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 GZMAP12544 262 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 ADCY2Q08462 1091 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 IFRD2Q12894 506 aaPredicted RBP12.19□□□□□ -0.46
HPS4-212ENST00000481910 PDCLQ13371 301 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 PLD1Q13393 1074 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 VEPH1Q14D04 833 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 TAF12Q16514 161 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 ACAD10Q6JQN1 1059 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 DENND5BQ6ZUT9 1274 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 NUP93Q8N1F7 819 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 CCDC112Q8NEF3 446 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 KCTD13Q8WZ19 329 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 CASP10Q92851 521 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 PPP1R13BQ96KQ4 1090 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 HSFY1Q96LI6 401 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 CEP295NLQ96MC4 621 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 SYNCQ9H7C4 482 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 SPTLC3Q9NUV7 552 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 TAS2R14Q9NYV8 317 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
HPS4-212ENST00000481910 CCDC195A0A1B0GUA6 201 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 GLP2RO95838 553 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 LCP1P13796 627 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 CYLC1P35663 651 aaPredicted RBP12.18□□□□□ -0.46
HPS4-212ENST00000481910 ACADSBP45954 432 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 TKTL1P51854 596 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 SLC5A3P53794 718 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 SNX16P57768 344 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 CENPCQ03188 943 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 ADAM15Q13444 863 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 CCDC122Q5T0U0 273 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 TMEM184AQ6ZMB5 413 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 GPRIN1Q7Z2K8 1008 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 ELMOD1Q8N336 334 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 SCAMP5Q8TAC9 235 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 ZNF512Q96ME7 567 aaPredicted RBP12.18□□□□□ -0.46
HPS4-212ENST00000481910 GUCD1Q96NT3 240 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 CPXM1Q96SM3 734 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 SLC4A5Q9BY07 1137 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 MTMR10Q9NXD2 777 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 MAGED2Q9UNF1 606 aaPredicted RBP12.18□□□□□ -0.46
HPS4-212ENST00000481910 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
HPS4-212ENST00000481910 TRANK1O15050 2925 aa12.18□□□□□ -0.46
HPS4-212ENST00000481910 SLC38A8A6NNN8 435 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 TNFRSF10BO14763 440 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 CCL16O15467 120 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 NCK2O43639 380 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 RTN2O75298 545 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 GABBR2O75899 941 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 FTLP02792 175 aaPredicted RBP12.17□□□□□ -0.46
HPS4-212ENST00000481910 HNRNPA1P09651 372 aaKnown RBP eCLIP12.17□□□□□ -0.46
HPS4-212ENST00000481910 CSH1P0DML2 217 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 CSH2P0DML3 217 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 FOSL2P15408 326 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 ADIGQ0VDE8 80 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 MTMR3Q13615 1198 aa12.17□□□□□ -0.46
HPS4-212ENST00000481910 MTF1Q14872 753 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms