RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SLC39A12Q504Y0 691 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 IL31Q6EBC2 164 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 CRYGNQ8WXF5 182 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 RIN2Q8WYP3 895 aaPredicted RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 KAT5Q92993 513 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 USP13Q92995 863 aaPredicted RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 XAB2Q9HCS7 855 aaKnown RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 XPO7Q9UIA9 1087 aaKnown RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 SMIM28A0A1B0GU29 152 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 IRF1P10914 325 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 RILPQ96NA2 401 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 CHORDC1Q9UHD1 332 aaPredicted RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 CTIFO43310 598 aaKnown RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 CNMDO75829 334 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 VSNL1P62760 191 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 FMO1Q01740 532 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 NAPEPLDQ6IQ20 393 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 WDR59Q6PJI9 974 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 GOLPH3Q9H4A6 298 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 ABCC13Q9NSE7 274 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 TAF1LQ8IZX4 1826 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 CCDC130P13994 396 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 IRF2BP2Q7Z5L9 587 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 LNX1Q8TBB1 728 aaPredicted RBP20.05■□□□□ 0.8
CCM2-214ENST00000481194 CYTH2Q99418 400 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 CYP4F11Q9HBI6 524 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 LMCD1Q9NZU5 365 aa20.05■□□□□ 0.8
CCM2-214ENST00000481194 CCDC149Q6ZUS6 474 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 SGIP1Q9BQI5 828 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 TBK1Q9UHD2 729 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 NEU2Q9Y3R4 380 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 COPEO14579 308 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 BNIP3LO60238 219 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 CAPN15O75808 1086 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 MAP7Q14244 749 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 USP41Q3LFD5 358 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 ACBD5Q5T8D3 534 aaPredicted RBP20.04■□□□□ 0.8
CCM2-214ENST00000481194 KATNAL2Q8IYT4 538 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 WHRNQ9P202 907 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 EPHB6O15197 1021 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 MRPL17Q9NRX2 175 aaKnown RBP20.04■□□□□ 0.8
CCM2-214ENST00000481194 SUN1O94901 812 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 OXCT1P55809 520 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 DENND1BQ6P3S1 775 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 NT5DC3Q86UY8 548 aa20.04■□□□□ 0.8
CCM2-214ENST00000481194 CCDC6Q16204 474 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 LZTR1Q8N653 840 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 NOS2P35228 1153 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 NR2C2P49116 596 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 GEMP55040 296 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 PRAMEP78395 509 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 ACCSLQ4AC99 568 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 RBM15Q96T37 977 aaKnown RBP eCLIP20.03■□□□□ 0.8
CCM2-214ENST00000481194 XYLBO75191 536 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 GSTA1P08263 222 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 GSTA2P09210 222 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 LAG3P18627 525 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 SERPINB9P50453 376 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 NOMO3P69849 1222 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 RAPGEF5Q92565 580 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 LPPQ93052 612 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 LENG1Q96BZ8 264 aaPredicted RBP20.03■□□□□ 0.8
CCM2-214ENST00000481194 DYRK4Q9NR20 520 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 LTFP02788 710 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 PURAQ00577 322 aaKnown RBP20.03■□□□□ 0.8
CCM2-214ENST00000481194 SPARCL1Q14515 664 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 UGP2Q16851 508 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 TAPT1Q6NXT6 567 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 CCNJLQ8IV13 435 aa20.03■□□□□ 0.8
CCM2-214ENST00000481194 RPRD1AQ96P16 312 aaPredicted RBP20.03■□□□□ 0.8
CCM2-214ENST00000481194 SLC12A8A0AV02 714 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 E5RJQ4 531 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 FIBCD1Q8N539 461 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 PDCD6IPQ8WUM4 868 aaKnown RBP20.02■□□□□ 0.8
CCM2-214ENST00000481194 SKA2Q8WVK7 121 aaPredicted RBP20.02■□□□□ 0.8
CCM2-214ENST00000481194 ARVCFO00192 962 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 CCL23P55773 120 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 EFEMP1Q12805 493 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 EMC1Q8N766 993 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 HNRNPLLQ8WVV9 542 aaKnown RBP20.02■□□□□ 0.8
CCM2-214ENST00000481194 HHIPL1Q96JK4 782 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 ANGPTL3Q9Y5C1 460 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 RASA4BC9J798 803 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 XPO1O14980 1071 aaKnown RBP20.02■□□□□ 0.8
CCM2-214ENST00000481194 RASA4O43374 803 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 APRTP07741 180 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 PABPC1LQ4VXU2 614 aaKnown RBP20.02■□□□□ 0.8
CCM2-214ENST00000481194 C2CD6Q53TS8 623 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 RIBC1Q8N443 379 aaPredicted RBP20.02■□□□□ 0.8
CCM2-214ENST00000481194 TTC8Q8TAM2 541 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 GDAP1Q8TB36 358 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 COQ4Q9Y3A0 265 aa20.02■□□□□ 0.8
CCM2-214ENST00000481194 IGF2BP3O00425 579 aaKnown RBP eCLIP20.02■□□□□ 0.79
CCM2-214ENST00000481194 JAM2P57087 298 aa20.02■□□□□ 0.79
CCM2-214ENST00000481194 MAMLD1Q13495 774 aa20.02■□□□□ 0.79
CCM2-214ENST00000481194 GANCQ8TET4 914 aa20.02■□□□□ 0.79
CCM2-214ENST00000481194 ASIC4Q96FT7 647 aa20.02■□□□□ 0.79
CCM2-214ENST00000481194 ROPN1BQ9BZX4 212 aaPredicted RBP20.02■□□□□ 0.79
CCM2-214ENST00000481194 DCLK3Q9C098 648 aa20.02■□□□□ 0.79
CCM2-214ENST00000481194 ROPN1Q9HAT0 212 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms