RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	BPIFB1	Q8TDL5	484 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	SOCS4	Q8WXH5	440 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	AIFM3	Q96NN9	605 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	THAP7	Q9BT49	309 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	GBA2	Q9HCG7	927 aa	Predicted RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	TYW1	Q9NV66	732 aa	Known RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	ZIM2	Q9NZV7	527 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	NOB1	Q9ULX3	412 aa	Known RBP	4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	PROCR	Q9UNN8	238 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	FER1L4	A9Z1Z3	1794 aa		4.03	□□□□□ -1.76
CCNL1-223	ENST00000481173	USP19	O94966	1318 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	E2F8	A0AVK6	867 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	TBC1D4	O60343	1298 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	CTNND1	O60716	968 aa	Known RBP	4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	OAZ2	O95190	189 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	XRCC6	P12956	609 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	WNT3	P56703	355 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	GHRHR	Q02643	423 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	SLC13A2	Q13183	592 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	SEMA3A	Q14563	771 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	CYP1B1	Q16678	543 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZDHHC24	Q6UX98	284 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZNF813	Q6ZN06	617 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	C9orf47	Q6ZRZ4	202 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	OVCH2	Q7RTZ1	564 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	GAS2L3	Q86XJ1	694 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	KBTBD7	Q8WVZ9	684 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	C17orf80	Q9BSJ5	609 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	B3GNT5	Q9BYG0	378 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	CDH19	Q9H159	772 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	SMURF2	Q9HAU4	748 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	ATP6V0A4	Q9HBG4	840 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	TRMT13	Q9NUP7	481 aa	Known RBP	4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	LPAR3	Q9UBY5	353 aa		4.02	□□□□□ -1.77
CCNL1-223	ENST00000481173	TCRBV5S1A1T	A0A578	114 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173		H3BNX3	289 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	TUSC2	O75896	110 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	TJP3	O95049	919 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	CRYAB	P02511	175 aa	Known RBP	4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	DLD	P09622	509 aa	Known RBP	4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	SLC7A1	P30825	629 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	AGFG1	P52594	562 aa	Known RBP	4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZNF91	Q05481	1191 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	ERV3-1	Q14264	604 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	TWIST1	Q15672	202 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	FAM187B	Q17R55	369 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	ANO6	Q4KMQ2	910 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	RNASE12	Q5GAN4	147 aa	Known RBP	4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	DCAF12L1	Q5VU92	463 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	IL31RA	Q8NI17	732 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	LYZL4	Q96KX0	146 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	PRR25	Q96S07	402 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZSCAN32	Q9NX65	697 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	GABRQ	Q9UN88	632 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	SQOR	Q9Y6N5	450 aa		4.01	□□□□□ -1.77
CCNL1-223	ENST00000481173	GTPBP1	O00178	669 aa	Known RBP	4	□□□□□ -1.77
CCNL1-223	ENST00000481173	CES2	O00748	559 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	TBX3	O15119	743 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	PHGDH	O43175	533 aa	Known RBP	4	□□□□□ -1.77
CCNL1-223	ENST00000481173	PRPF3	O43395	683 aa	Known RBP	4	□□□□□ -1.77
CCNL1-223	ENST00000481173	RFPL1	O75677	317 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	PRKCB	P05771	671 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	PSG1	P11464	419 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	SUMO3	P55854	103 aa	Predicted RBP	4	□□□□□ -1.77
CCNL1-223	ENST00000481173	PSG6	Q00889	435 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	MLC1	Q15049	377 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	AWAT1	Q58HT5	328 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	SWSAP1	Q6NVH7	229 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	KCTD20	Q7Z5Y7	419 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	PIP4P1	Q86T03	277 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZNF548	Q8NEK5	533 aa	Predicted RBP	4	□□□□□ -1.77
CCNL1-223	ENST00000481173	OR56A3	Q8NH54	315 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	DNAJB14	Q8TBM8	379 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	MAML1	Q92585	1016 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	MMS19	Q96T76	1030 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	DPH1	Q9BZG8	443 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	VPS33B	Q9H267	617 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	HIPK2	Q9H2X6	1198 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	SACM1L	Q9NTJ5	587 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	CPNE7	Q9UBL6	633 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZNF112	Q9UJU3	913 aa		4	□□□□□ -1.77
CCNL1-223	ENST00000481173	THRAP3	Q9Y2W1	955 aa	Known RBP	4	□□□□□ -1.77
CCNL1-223	ENST00000481173	FAM90A8P	A6NJQ4	464 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	TMEM232	C9JQI7	657 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	SMAD6	O43541	496 aa	Known RBP	3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	GCAT	O75600	419 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	A1BG	P04217	495 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	FAM90A13P	P0C7W8	464 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	FAM90A24P	P0C7X0	464 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	EN2	P19622	333 aa	Predicted RBP	3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	ITGA8	P53708	1063 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	EPHB1	P54762	984 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	RAB32	Q13637	225 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	MAEA	Q7L5Y9	396 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	SPART	Q8N0X7	666 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	SIRT6	Q8N6T7	355 aa		3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	OSR1	Q8TAX0	266 aa	Predicted RBP	3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	ZBTB45	Q96K62	511 aa	Predicted RBP	3.99	□□□□□ -1.77
CCNL1-223	ENST00000481173	SIGLEC11	Q96RL6	698 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms