RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 DGKEP52429 567 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 SLC5A3P53794 718 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 DHCR24Q15392 516 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 SF3A2Q15428 464 aaKnown RBP16.17■□□□□ 0.18
LIMS3-203ENST00000480744 SGSM1Q2NKQ1 1148 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 ZACNQ401N2 412 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 SPOPLQ6IQ16 392 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 PAQR9Q6ZVX9 377 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 DDX42Q86XP3 938 aaKnown RBP eCLIP16.17■□□□□ 0.18
LIMS3-203ENST00000480744 C12orf50Q8NA57 414 aaPredicted RBP16.17■□□□□ 0.18
LIMS3-203ENST00000480744 TSTD1Q8NFU3 115 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 CCDC26Q8TAB7 109 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 TMC2Q8TDI7 906 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 NACA2Q9H009 215 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 FAM49BQ9NUQ9 324 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 GMIPQ9P107 970 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 HMGXB4Q9UGU5 601 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 MAPK8IP1Q9UQF2 711 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 HPSEQ9Y251 543 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 NUP205Q92621 2012 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 MYO18AQ92614 2054 aaKnown RBP16.16■□□□□ 0.18
LIMS3-203ENST00000480744 DCLK1O15075 740 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 COCHO43405 550 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 FOXD2O60548 495 aaPredicted RBP16.16■□□□□ 0.18
LIMS3-203ENST00000480744 AKAP3O75969 853 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 KIF20AO95235 890 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 HLA-DRAP01903 254 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 SLC6A11P48066 632 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 NDUFA8P51970 172 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 NDST1P52848 882 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 GAB4Q2WGN9 574 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 SV2AQ7L0J3 742 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 TTC30AQ86WT1 665 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 ADGRG2Q8IZP9 1017 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 FUKQ8N0W3 1084 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 CCDC33Q8N5R6 958 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 SLC2A14Q8TDB8 520 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 USP33Q8TEY7 942 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 OVCA2Q8WZ82 227 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 TAF4BQ92750 862 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 LOXL4Q96JB6 756 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 CCSER2Q9H7U1 834 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 INVSQ9Y283 1065 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 SH3BP1Q9Y3L3 701 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 ABCA7Q8IZY2 2146 aa16.16■□□□□ 0.18
LIMS3-203ENST00000480744 ANTXRLA6NF34 631 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 K7EQS6 105 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 TNFRSF10BO14763 440 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 ADH1CP00326 375 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 TRIM49P0CI25 452 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 TRIM49CP0CI26 452 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 IRF1P10914 325 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 ADH5P11766 374 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 NR2F2P24468 414 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 ADORA2BP29275 332 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 GBP1P32455 592 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 VAMP7P51809 220 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 MAP3K7CLP57077 242 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 KDSRQ06136 332 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 PLK5Q496M5 336 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 KIAA1958Q8N8K9 716 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 JAKMIP2Q96AA8 810 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 PNKPQ96T60 521 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 SMOQ99835 787 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 TPSD1Q9BZJ3 242 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 IMPG2Q9BZV3 1241 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 SMOC1Q9H4F8 434 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 TBC1D14Q9P2M4 693 aa16.15■□□□□ 0.18
LIMS3-203ENST00000480744 E2F8A0AVK6 867 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 IKBKBO14920 756 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 BEST1O76090 585 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 KAT7O95251 611 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ASS1P00966 412 aaKnown RBP16.14■□□□□ 0.17
LIMS3-203ENST00000480744 APODP05090 189 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 KRT13P13646 458 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 TRIM21P19474 475 aaKnown RBP16.14■□□□□ 0.17
LIMS3-203ENST00000480744 MPLP40238 635 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ASPAP45381 313 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 GCLMP48507 274 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ELF2Q15723 593 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 PPM1JQ5JR12 505 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 LY6G5CQ5SRR4 150 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 C1orf220Q5T0J3 134 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 IL31Q6EBC2 164 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ANO7Q6IWH7 933 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 RHBDF2Q6PJF5 856 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 C12orf40Q86WS4 652 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 SFTPA1Q8IWL2 248 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 C12orf29Q8N999 325 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ZMIZ2Q8NF64 920 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 TMEM174Q8WUU8 243 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ZC3H10Q96K80 434 aaKnown RBP16.14■□□□□ 0.17
LIMS3-203ENST00000480744 DUSP15Q9H1R2 295 aaPredicted RBP16.14■□□□□ 0.17
LIMS3-203ENST00000480744 ARHGEF4Q9NR80 690 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 COMMD8Q9NX08 183 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 EBF1Q9UH73 591 aa16.14■□□□□ 0.17
LIMS3-203ENST00000480744 TRAF3IP3Q9Y228 551 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms