RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 SCARA3Q6AZY7 606 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 C4orf50Q6ZRC1 276 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 IKBIPQ70UQ0 350 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 LPCAT2Q7L5N7 544 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF571Q7Z3V5 609 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 MTDHQ86UE4 582 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 APOBEC3FQ8IUX4 373 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FBXO36Q8NEA4 188 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 VPS45Q9NRW7 570 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM153AQ9UHL3 310 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CENPXA8MT69 81 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PRR23D1E9PI22 279 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 H3BMM5 538 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 C21orf2O43822 256 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PDE9AO76083 593 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT6AP02538 564 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT6BP04259 564 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 PRR23D2P0DMB1 279 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FECHP22830 423 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SERPINB5P36952 375 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TALDO1P37837 337 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 NAMPTP43490 491 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 KRT6CP48668 564 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ST13P50502 369 aaKnown RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TOB1P50616 345 aaPredicted RBP6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 VEPH1Q14D04 833 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 SPANXN2Q5MJ10 180 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 GPAT2Q6NUI2 795 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF544Q6NX49 715 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 BBS12Q6ZW61 710 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 ULK2Q8IYT8 1036 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CGRRF1Q99675 332 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 FANCEQ9HB96 536 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TRIM10Q9UDY6 481 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 STK39Q9UEW8 545 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 CIDEBQ9UHD4 219 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 AGAP1Q9UPQ3 857 aa6.36□□□□□ -1.39
PRPF4B-205ENST00000480058 TARSP26639 723 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 Q4G0T1 1027 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 RNF219Q5W0B1 726 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 PLEKHM3Q6ZWE6 761 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ANKMY2Q8IV38 441 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 STKLD1Q8NE28 680 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 RDH11Q8TC12 318 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 RORBQ92753 470 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 PTCD3Q96EY7 689 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TIMMDC1Q9NPL8 285 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM260Q9NX78 707 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 PRR12Q9ULL5 1215 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TBX20Q9UMR3 447 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SESN1Q9Y6P5 492 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 MATN2O00339 956 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ECM2O94769 699 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ABL1P00519 1130 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ALDH5A1P51649 535 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CSE1LP55060 971 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CDH17Q12864 832 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM132DQ14C87 1099 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NCF4Q15080 339 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 FAM98BQ52LJ0 330 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TMCO4Q5TGY1 634 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NUDT18Q6ZVK8 323 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 IFNEQ86WN2 208 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 C12orf56Q8IXR9 622 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC44A5Q8NCS7 719 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 GPAMQ9HCL2 828 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 KLHL3Q9UH77 587 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 USP21Q9UK80 565 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CAB39Q9Y376 341 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CD163L1Q9NR16 1453 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM114B3SHH9 223 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ATP9BO43861 1147 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TLR2O60603 784 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NPTXRO95502 500 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ATP6V1B1P15313 513 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CD44P16070 742 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NCKAP1LP55160 1127 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 BNIP2Q12982 314 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 AUHQ13825 339 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 BLMHQ13867 455 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 HLFQ16534 295 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 HDDC2Q7Z4H3 204 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 RNF149Q8NC42 400 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF333Q96JL9 665 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TMEM120AQ9BXJ8 343 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 MUC13Q9H3R2 512 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 CNGB3Q9NQW8 809 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 MARCOQ9UEW3 520 aaPredicted RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 FETUBQ9UGM5 382 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TMCC3Q9ULS5 477 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SIK3Q9Y2K2 1263 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NDUFAF1Q9Y375 327 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 SNX13Q9Y5W8 968 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TRPM1Q7Z4N2 1603 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 NRKQ7Z2Y5 1582 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 EEF2KO00418 725 aaKnown RBP6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 MAGEC1O60732 1142 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 AKAP3O75969 853 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 FKBP9O95302 570 aa6.35□□□□□ -1.39
PRPF4B-205ENST00000480058 TGFB3P10600 412 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms