RNA–Protein interactions for RNA: ENST00000479810.6

FAM3B-205, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 2,742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-205ENST00000479810 TBCBQ99426 244 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 HNRNPABQ99729 332 aaKnown RBP13.74□□□□□ -0.21
FAM3B-205ENST00000479810 TMEM106CQ9BVX2 250 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 MCOLN1Q9GZU1 580 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 NEUROG2Q9H2A3 272 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.74□□□□□ -0.21
FAM3B-205ENST00000479810 ADAM28Q9UKQ2 775 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 STRIP2Q9ULQ0 834 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 MFHAS1Q9Y4C4 1052 aa13.74□□□□□ -0.21
FAM3B-205ENST00000479810 DAPK3O43293 454 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 GRIK1P39086 918 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 SLC25A11Q02978 314 aaKnown RBP13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ZNF268Q14587 947 aaPredicted RBP13.73□□□□□ -0.21
FAM3B-205ENST00000479810 SIX1Q15475 284 aaPredicted RBP13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ARHGAP17Q68EM7 881 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 C16orf59Q7L2K0 433 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 PWWP2AQ96N64 755 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 DNAJC17Q9NVM6 304 aaKnown RBP13.73□□□□□ -0.21
FAM3B-205ENST00000479810 USP18Q9UMW8 372 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 SQORQ9Y6N5 450 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 CAND2O75155 1236 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ZSCAN5DPP0CG00 497 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 GPD1P21695 349 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 GABRB2P47870 512 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 LHX1P48742 406 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 HDAC4P56524 1084 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 IKBKEQ14164 716 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ODF2Q5BJF6 829 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 INTS6LQ5JSJ4 861 aaKnown RBP13.73□□□□□ -0.21
FAM3B-205ENST00000479810 METTL23Q86XA0 190 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 SIX6OS1Q8N1H7 587 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 CCDC185Q8N715 623 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 CASKIN2Q8WXE0 1202 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ARMC5Q96C12 935 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 VN1R3Q9BXE9 311 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ANLNQ9NQW6 1124 aa13.73□□□□□ -0.21
FAM3B-205ENST00000479810 ZMYND8Q9ULU4 1186 aaPredicted RBP13.73□□□□□ -0.21
FAM3B-205ENST00000479810 MIF4GDA9UHW6 222 aaKnown RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 M0QZQ0 153 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 TNNT3P45378 269 aaPredicted RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 USP46P62068 366 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 CTXN3Q4LDR2 81 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 UBAP2Q5T6F2 1119 aaKnown RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 CYP4V2Q6ZWL3 525 aaPredicted RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 NPAS4Q8IUM7 802 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 OSBPL8Q9BZF1 889 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 KIAA1257Q9ULG3 409 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 SNX24Q9Y343 169 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 COL6A3P12111 3177 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 F5H423 210 aaPredicted RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 I6L893 689 aaPredicted RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 FYNP06241 537 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 SKIP12755 728 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 CPB1P15086 417 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 HLTFQ14527 1009 aaKnown RBP eCLIP13.72□□□□□ -0.218e-6■■■■□ 21.3
FAM3B-205ENST00000479810 TCEAL1Q15170 157 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 CCDC137Q6PK04 289 aaKnown RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 NECAB2Q7Z6G3 386 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 CCDC105Q8IYK2 499 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 MMGT1Q8N4V1 131 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 BADQ92934 168 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 CCDC114Q96M63 670 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
FAM3B-205ENST00000479810 ZNF638Q14966 1978 aaKnown RBP13.72□□□□□ -0.21
FAM3B-205ENST00000479810 MDM4O15151 490 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 RNF8O76064 485 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 NCAM1P13591 858 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 SDC4P31431 198 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 FAM193AP78312 1265 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 TUBB2AQ13885 445 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 FUT10Q6P4F1 479 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 MSANTD4Q8NCY6 345 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 GIPC2Q8TF65 315 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 SLITRK1Q96PX8 696 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 SEPT5Q99719 369 aaPredicted RBP13.71□□□□□ -0.21
FAM3B-205ENST00000479810 TUBB2BQ9BVA1 445 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 STIM2Q9P246 746 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 CDY1Q9Y6F8 540 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 DOCK6Q96HP0 2047 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 DNAH14Q0VDD8 3507 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 MSI1O43347 362 aaKnown RBP13.71□□□□□ -0.21
FAM3B-205ENST00000479810 TBX18O95935 607 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 ALDH7A1P49419 539 aaKnown RBP13.71□□□□□ -0.21
FAM3B-205ENST00000479810 CTCFP49711 727 aaPredicted RBP13.71□□□□□ -0.21
FAM3B-205ENST00000479810 ZNF143P52747 638 aaPredicted RBP13.71□□□□□ -0.21
FAM3B-205ENST00000479810 CDH6P55285 790 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 RNF19BQ6ZMZ0 732 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 TP53INP2Q8IXH6 220 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 KCTD6Q8NC69 237 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 CDH9Q9ULB4 789 aa13.71□□□□□ -0.21
FAM3B-205ENST00000479810 MAGED2Q9UNF1 606 aaPredicted RBP13.71□□□□□ -0.21
FAM3B-205ENST00000479810 ATP8B3O60423 1300 aa13.71□□□□□ -0.22
FAM3B-205ENST00000479810 HHLA1C9JL84 531 aa13.7□□□□□ -0.22
FAM3B-205ENST00000479810 XPO1O14980 1071 aaKnown RBP13.7□□□□□ -0.22
FAM3B-205ENST00000479810 CXCL10P02778 98 aa13.7□□□□□ -0.22
FAM3B-205ENST00000479810 CTNNA2P26232 953 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms