RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MYO18AQ92614 2054 aaKnown RBP18.44■□□□□ 0.54
ECHDC1-216ENST00000479525 DCDC2BA2VCK2 349 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 TNFRSF10BO14763 440 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 GDF9O60383 454 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 ASS1P00966 412 aaKnown RBP18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 DRD1P21728 446 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 AP3M2P53677 418 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 SLC7A9P82251 487 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 SGSM1Q2NKQ1 1148 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 ZNF394Q53GI3 561 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 TTC30AQ86WT1 665 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 CCDC33Q8N5R6 958 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 CCDC47Q96A33 483 aaKnown RBP18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 SMARCD1Q96GM5 515 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 DMAP1Q9NPF5 467 aaPredicted RBP18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 NUDT5Q9UKK9 219 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 TRAF3IP3Q9Y228 551 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 ABCA7Q8IZY2 2146 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 NUP205Q92621 2012 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 ATP8B3O60423 1300 aa18.43■□□□□ 0.54
ECHDC1-216ENST00000479525 MDM4O15151 490 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 NFATC1O95644 943 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 OLFM2O95897 454 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 CCDC192P0DO97 292 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 DHCR24Q15392 516 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 NAT16Q8N8M0 369 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 SEMA4DQ92854 862 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 ERLEC1Q96DZ1 483 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 TNIP3Q96KP6 325 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 ZFRQ96KR1 1074 aaKnown RBP18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 TPSD1Q9BZJ3 242 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 SCAND2PQ9GZW5 306 aaPredicted RBP18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 DLL3Q9NYJ7 618 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 A0A1W2PQ27 194 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 A0A1W2PQ64 194 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 A0A1W2PQD8 194 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 K7EQS6 105 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 TBX18O95935 607 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 FAM163BP0C2L3 166 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 TCF3P15923 654 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 ATXN1P54253 815 aaKnown RBP18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 AMPD2Q01433 879 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 ADAM9Q13443 819 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 DMC1Q14565 340 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 PUM1Q14671 1186 aaKnown RBP eCLIP18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 SF3A2Q15428 464 aaKnown RBP18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 EMC10Q5UCC4 262 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 ISM2Q6H9L7 571 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 ARRDC1-AS1Q9H2J1 176 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 SEMA4GQ9NTN9 838 aa18.42■□□□□ 0.54
ECHDC1-216ENST00000479525 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 CYP26A1O43174 497 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 RPP40O75818 363 aaKnown RBP18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 RTN3O95197 1032 aaPredicted RBP18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 KIF20AO95235 890 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 MYL1P05976 194 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 RETP07949 1114 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 KRT13P13646 458 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 P4HA1P13674 534 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 PDE6CP51160 858 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 NR1H3Q13133 447 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 ZCWPW2Q504Y3 356 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 LY6G5CQ5SRR4 150 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 RHBDF2Q6PJF5 856 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 ERMP1Q7Z2K6 904 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 BBS7Q8IWZ6 715 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 ADGRG2Q8IZP9 1017 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 GUF1Q8N442 669 aaKnown RBP18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 WHAMMQ8TF30 809 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 OSER1Q9NX31 292 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 EHD2Q9NZN4 543 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 CDV3Q9UKY7 258 aaKnown RBP18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 LAMA1P25391 3075 aa18.41■□□□□ 0.54
ECHDC1-216ENST00000479525 TRIM49BA6NDI0 452 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 TRIM24O15164 1050 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 HNRNPLP14866 589 aaKnown RBP eCLIP18.4■□□□□ 0.541e-9■□□□□ 8.8
ECHDC1-216ENST00000479525 KCNA4P22459 653 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 TIE1P35590 1138 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 HECTD3Q5T447 861 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 PRR23CQ6ZRP0 262 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 CLEC20AQ6ZU45 233 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 GAB3Q8WWW8 586 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 CYFIP2Q96F07 1278 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 CEP295NLQ96MC4 621 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 ARID3AQ99856 593 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 RXFP3Q9NSD7 469 aa18.4■□□□□ 0.54
ECHDC1-216ENST00000479525 CEP192Q8TEP8 1941 aa18.39■□□□□ 0.54
ECHDC1-216ENST00000479525 IKBKBO14920 756 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 ATG13O75143 517 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 FAM200BP0CF97 657 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 PSMC2P35998 433 aaKnown RBP18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 PRCPP42785 496 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 DGKEP52429 567 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 PMS1P54277 932 aaKnown RBP18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 INTS8Q75QN2 995 aaKnown RBP18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 CRYBG2Q8N1P7 616 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 PDZD8Q8NEN9 1154 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 USP33Q8TEY7 942 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 TATDN2Q93075 761 aa18.39■□□□□ 0.53
ECHDC1-216ENST00000479525 NACA2Q9H009 215 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms