RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 RNF157Q96PX1 679 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 PEBP4Q96S96 227 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 TSSK1BQ9BXA7 367 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 STAU2Q9NUL3 570 aaKnown RBP eCLIP25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 SLC17A7Q9P2U7 560 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 BARX2Q9UMQ3 279 aaPredicted RBP25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 LOC102724159A0A0B4J2E5 919 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 GPR25O00155 361 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 DPYSL4O14531 572 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 TRDMT1O14717 391 aaKnown RBP25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 KIF1CO43896 1103 aaKnown RBP25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 PWP2Q15269 919 aaKnown RBP25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 CTC1Q2NKJ3 1217 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 JADE1Q6IE81 842 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 LCLAT1Q6UWP7 414 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 AFG1LQ8WV93 481 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 SPATA33Q96N06 139 aa25.67■■□□□ 1.7
SYNGAP1-206ENST00000479510 ZNF487B1APH4 448 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 IRF6O14896 467 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 LMNAP02545 664 aaKnown RBP25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 VGLL4Q14135 290 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 SLC26A11Q86WA9 606 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 IGDCC3Q8IVU1 814 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 DHX37Q8IY37 1157 aaKnown RBP25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 STK32AQ8WU08 396 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 HEXIM2Q96MH2 286 aaKnown RBP25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 TBCBQ99426 244 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 USP29Q9HBJ7 922 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 HMGXB4Q9UGU5 601 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 PTPRFP10586 1907 aa25.66■■□□□ 1.7
SYNGAP1-206ENST00000479510 KBTBD13C9JR72 458 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 BAG6P46379 1132 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 HIRAP54198 1017 aaPredicted RBP25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 KBTBD12Q3ZCT8 623 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 PLEKHG4Q58EX7 1191 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 TTC39BQ5VTQ0 682 aaPredicted RBP25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 EEPD1Q7L9B9 569 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 MTDHQ86UE4 582 aaKnown RBP25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 NT5DC4Q86YG4 428 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 TMEM192Q8IY95 271 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 RXFP2Q8WXD0 754 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 FAF2Q96CS3 445 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 LRRC39Q96DD0 335 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ADAM33Q9BZ11 813 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 KANSL3Q9P2N6 904 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 H7C0C1 242 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 PEX11AO75192 247 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 PDGFRAP16234 1089 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ATP5OP48047 213 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 PRKD1Q15139 912 aaPredicted RBP25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ANKRD20A2Q5SQ80 823 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 LGSNQ5TDP6 509 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ANKRD20A1Q5TYW2 823 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ANKRD20A3Q5VUR7 823 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 CCDC62Q6P9F0 684 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ZNF449Q6P9G9 518 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 TRIM42Q8IWZ5 723 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 MIEF2Q96C03 454 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 HPDLQ96IR7 371 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 MINDY3Q9H8M7 445 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 GPRC5DQ9NZD1 345 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 ITGA11Q9UKX5 1188 aa25.65■■□□□ 1.7
SYNGAP1-206ENST00000479510 BCLAF3A2AJT9 711 aaKnown RBP25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 CCDC22O60826 627 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 LUC7L3O95232 432 aaKnown RBP25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 CBX6O95503 412 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 GNAZP19086 355 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 YWHAGP61981 247 aaKnown RBP eCLIP25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 CMPK2Q5EBM0 449 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 ZNF484Q5JVG2 852 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 FAM91A1Q658Y4 838 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 ZNF570Q96NI8 536 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 CNTN3Q9P232 1028 aa25.64■■□□□ 1.7
SYNGAP1-206ENST00000479510 WDR91A4D1P6 747 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 ARFIP2P53365 341 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 FAAP100Q0VG06 881 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 MMRN1Q13201 1228 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 KRT81Q14533 505 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 KRT72Q14CN4 511 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 PLD5Q8N7P1 536 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 MCUQ8NE86 351 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 SERAC1Q96JX3 654 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 FGD4Q96M96 766 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 MKS1Q9NXB0 559 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 C2CD2Q9Y426 696 aa25.64■■□□□ 1.69
SYNGAP1-206ENST00000479510 GOLGA8RI6L899 631 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 LIN7AO14910 233 aaPredicted RBP25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 KRT37O76014 449 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 TOMM70O94826 608 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 HAUS5O94927 633 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 C22orf31O95567 290 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 ORC1Q13415 861 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 RFWD2Q8NHY2 731 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 KLC2Q9H0B6 622 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 IFT122Q9HBG6 1241 aa25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 GBA2Q9HCG7 927 aaPredicted RBP25.63■■□□□ 1.69
SYNGAP1-206ENST00000479510 PEX10O60683 326 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 C1QAP02745 245 aa25.62■■□□□ 1.69
SYNGAP1-206ENST00000479510 DESP17661 470 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms