RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 RPL34P49207 117 aaKnown RBP16.32■□□□□ 0.2
C9orf3-217ENST00000479161 FKBP15Q5T1M5 1219 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 KLHDC7AQ5VTJ3 777 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 APTXQ7Z2E3 356 aaKnown RBP16.32■□□□□ 0.2
C9orf3-217ENST00000479161 PIGZQ86VD9 579 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 FBXL6Q8N531 539 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 STK32AQ8WU08 396 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 SLC35F5Q8WV83 523 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 TFAP2BQ92481 460 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 PBXIP1Q96AQ6 731 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 RSPRY1Q96DX4 576 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 HSFY1Q96LI6 401 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 CDK5RAP1Q96SZ6 601 aaKnown RBP16.32■□□□□ 0.2
C9orf3-217ENST00000479161 DDX23Q9BUQ8 820 aaKnown RBP16.32■□□□□ 0.2
C9orf3-217ENST00000479161 NAA15Q9BXJ9 866 aaKnown RBP16.32■□□□□ 0.2
C9orf3-217ENST00000479161 OSBPL6Q9BZF3 934 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 KCNH6Q9H252 994 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 SMOC2Q9H3U7 446 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 BRD9Q9H8M2 597 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 CYLDQ9NQC7 956 aa16.32■□□□□ 0.2
C9orf3-217ENST00000479161 MYO16Q9Y6X6 1858 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 COL4A2P08572 1712 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 LGALS16A8MUM7 142 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 CD19P15391 556 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 COPB1P53618 953 aaKnown RBP16.31■□□□□ 0.2
C9orf3-217ENST00000479161 BPIFB4P59827 614 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 PDE4CQ08493 712 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 SLC44A4Q53GD3 710 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 HSP90AA4PQ58FG1 418 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 HECTD3Q5T447 861 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 HFE2Q6ZVN8 426 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
C9orf3-217ENST00000479161 DHX40Q8IX18 779 aaKnown RBP16.31■□□□□ 0.2
C9orf3-217ENST00000479161 YAF2Q8IY57 180 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 FAM71AQ8IYT1 594 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 LRRC3BQ96PB8 259 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 ERGIC2Q96RQ1 377 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 NELL2Q99435 816 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 FAM83CQ9BQN1 747 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 ARHGEF3Q9NR81 526 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 RAPGEFL1Q9UHV5 662 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 DNAJC12Q9UKB3 198 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 FBXL21Q9UKT6 434 aa16.31■□□□□ 0.2
C9orf3-217ENST00000479161 ARIH1Q9Y4X5 557 aaPredicted RBP16.31■□□□□ 0.2
C9orf3-217ENST00000479161 KRBA1A5PL33 1030 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 C2orf78A6NCI8 922 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 BECN2A8MW95 431 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 CKMP06732 381 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 CFHP08603 1231 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 UCHL3P15374 230 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 CDK11BP21127 795 aaKnown RBP16.3■□□□□ 0.2
C9orf3-217ENST00000479161 GDI1P31150 447 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 USP4Q13107 963 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 IQCB1Q15051 598 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 ZNF77Q15935 545 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 GOLGA7BQ2TAP0 167 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 GPRIN1Q7Z2K8 1008 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 TADA2BQ86TJ2 420 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 AOPEPQ8N6M6 819 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 ARL14EPQ8N8R7 260 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-217ENST00000479161 ZNF606Q8WXB4 792 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 SLC22A12Q96S37 553 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 ZSWIM1Q9BR11 485 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 STK33Q9BYT3 514 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 VPS16Q9H269 839 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 CNGB3Q9NQW8 809 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 TAB2Q9NYJ8 693 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 CHORDC1Q9UHD1 332 aaPredicted RBP16.3■□□□□ 0.2
C9orf3-217ENST00000479161 PCDHGC3Q9UN70 934 aa16.3■□□□□ 0.2
C9orf3-217ENST00000479161 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 SYCE3A1L190 88 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 MAN2B1O00754 1011 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 KRT5P13647 590 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 PTK2Q05397 1052 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 PDGFRLQ15198 375 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 MLF2Q15773 248 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-217ENST00000479161 IRGQQ8WZA9 623 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 LHX5Q9H2C1 402 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 C8orf33Q9H7E9 229 aaPredicted RBP16.29■□□□□ 0.2
C9orf3-217ENST00000479161 TRPC7Q9HCX4 862 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 GMIPQ9P107 970 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 CCL26Q9Y258 94 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
C9orf3-217ENST00000479161 FOXN3O00409 490 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-217ENST00000479161 PES1O00541 588 aaKnown RBP16.28■□□□□ 0.2
C9orf3-217ENST00000479161 COCHO43405 550 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 TLR5O60602 858 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 ZBED1O96006 694 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 GNA15P30679 374 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 GPD2P43304 727 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 ACADSBP45954 432 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 GRM2Q14416 872 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 ARHGAP44Q17R89 818 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 ZSCAN23Q3MJ62 389 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 ASTLQ6HA08 431 aaPredicted RBP16.28■□□□□ 0.2
C9orf3-217ENST00000479161 GJB7Q6PEY0 223 aa16.28■□□□□ 0.2
C9orf3-217ENST00000479161 SUGP1Q8IWZ8 645 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms