RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CDH15P55291 814 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 CCDC33Q8N5R6 958 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 THAP11Q96EK4 314 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A7Q9HAW7 530 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A10Q9HAW8 530 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 UGT1A8Q9HAW9 530 aa22.06■■□□□ 1.12
SDF4-206ENST00000478938 TRPM3Q9HCF6 1732 aaPredicted RBP22.06■■□□□ 1.12
SDF4-206ENST00000478938 IPO5O00410 1097 aaKnown RBP22.05■■□□□ 1.12
SDF4-206ENST00000478938 PRDX6P30041 224 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 MRPS22P82650 360 aaKnown RBP22.05■■□□□ 1.12
SDF4-206ENST00000478938 FAAP100Q0VG06 881 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 ADGRE1Q14246 886 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 MORF4L2Q15014 288 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 HIF1AQ16665 826 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 GPR180Q86V85 440 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 CATSPER3Q86XQ3 398 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 CABLES1Q8TDN4 633 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 E2F7Q96AV8 911 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 CAAP1Q9H8G2 361 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 RABGAP1Q9Y3P9 1069 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 CYB561D2O14569 222 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 AQP9O43315 295 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 PSMC3P17980 439 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 PEX3P56589 373 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 DLG4P78352 724 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 PTK7Q13308 1070 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 CLEC16AQ2KHT3 1053 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 FNBP1LQ5T0N5 605 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 KAZNQ674X7 775 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 VASH1Q7L8A9 365 aaPredicted RBP22.05■■□□□ 1.12
SDF4-206ENST00000478938 TICAM1Q8IUC6 712 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 IQCF2Q8IXL9 164 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 TAB3Q8N5C8 712 aaPredicted RBP22.05■■□□□ 1.12
SDF4-206ENST00000478938 NAP1L4Q99733 375 aaKnown RBP22.05■■□□□ 1.12
SDF4-206ENST00000478938 TMEM117Q9H0C3 514 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 SIAEQ9HAT2 523 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 SACM1LQ9NTJ5 587 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 GINM1Q9NU53 330 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 NCKIPSDQ9NZQ3 722 aa22.05■■□□□ 1.12
SDF4-206ENST00000478938 FRMPD2Q68DX3 1309 aaPredicted RBP22.05■■□□□ 1.12
SDF4-206ENST00000478938 LOC100653049A0A140TA62 436 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 TBCAO75347 108 aaKnown RBP22.04■■□□□ 1.12
SDF4-206ENST00000478938 KRT34O76011 436 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 KCNC4Q03721 635 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 KLHL38Q2WGJ6 581 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 RWDD4Q6NW29 188 aaKnown RBP22.04■■□□□ 1.12
SDF4-206ENST00000478938 CRLF3Q8IUI8 442 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 SERBP1Q8NC51 408 aaKnown RBP eCLIP22.04■■□□□ 1.125e-7■■■■□ 26.7
SDF4-206ENST00000478938 RIMS3Q9UJD0 308 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 CDC14AQ9UNH5 594 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 ZNF804BA4D1E1 1349 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 FAM47E-STBD1D6RA91 191 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 TCEA1P23193 301 aaKnown RBP22.04■■□□□ 1.12
SDF4-206ENST00000478938 TEX44Q53QW1 395 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 C2CD6Q53TS8 623 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 ZCCHC23Q6ZST2 131 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 LILRA2Q8N149 483 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 TBC1D15Q8TC07 691 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 NLRP7Q8WX94 980 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 APOL6Q9BWW8 343 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 STRCP1A6NGW2 1772 aa22.04■■□□□ 1.12
SDF4-206ENST00000478938 MCF2LO15068 1137 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 GNPATO15228 680 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 LIASO43766 372 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 ATE1O95260 518 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 CALCAP01258 141 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 KCNJ8Q15842 424 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 SH2D5Q6ZV89 423 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 NLRP4Q96MN2 994 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 WRNIP1Q96S55 665 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 FRMD4BQ9Y2L6 1034 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 SULT1C4O75897 302 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 KRT10P13645 584 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 CD247P20963 164 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 SLC18A2Q05940 514 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 C12orf60Q5U649 245 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 MIER3Q7Z3K6 550 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 RHPN2Q8IUC4 686 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 FBXO36Q8NEA4 188 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 HELQQ8TDG4 1101 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 NFASCO94856 1347 aa22.03■■□□□ 1.12
SDF4-206ENST00000478938 A0A0B4J269 797 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 A0A1W2PQ67 120 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 COPEO14579 308 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 SIN3BO75182 1162 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 IFNB1P01574 187 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 PSMC1P62191 440 aaKnown RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 TUBB3Q13509 450 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 PHKG1Q16816 387 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 ANKRD22Q5VYY1 191 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 CHERPQ8IWX8 916 aaKnown RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 ZNF444Q8N0Y2 327 aaPredicted RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 ANKRD36BP1Q96IX9 119 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 ZFYVE28Q9HCC9 887 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 SCHIP1Q9P0W5 487 aaPredicted RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 FETUBQ9UGM5 382 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 DNM3Q9UQ16 869 aa22.02■■□□□ 1.12
SDF4-206ENST00000478938 RPL10P27635 214 aaKnown RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 HOXA10P31260 410 aaPredicted RBP22.02■■□□□ 1.12
SDF4-206ENST00000478938 TAS2R40P59535 323 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms