RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 WEE1P30291 646 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 AVPR2P30518 371 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 STAT1P42224 750 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 FIGNQ5HY92 759 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 GAS2L3Q86XJ1 694 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 PDZD8Q8NEN9 1154 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 ST13P5Q8NFI4 369 aaPredicted RBP28.24■■■□□ 2.11
CCM2-211ENST00000478582 MRPS31Q92665 395 aaKnown RBP28.24■■■□□ 2.11
CCM2-211ENST00000478582 RPP25Q9BUL9 199 aaKnown RBP28.24■■■□□ 2.11
CCM2-211ENST00000478582 EDEM3Q9BZQ6 932 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 TRPM5Q9NZQ8 1165 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 WNT16Q9UBV4 365 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 FBXL21Q9UKT6 434 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 MYO6Q9UM54 1294 aa28.24■■■□□ 2.11
CCM2-211ENST00000478582 TULP2O00295 520 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 CBFA2T2O43439 604 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 TPM3P06753 285 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 GPD2P43304 727 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 CYP4F8P98187 520 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 GPR158Q5T848 1215 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 SNX30Q5VWJ9 437 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 CACNA2D4Q7Z3S7 1137 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 MON1AQ86VX9 555 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 SECISBP2LQ93073 1101 aaKnown RBP28.23■■■□□ 2.11
CCM2-211ENST00000478582 FBXO32Q969P5 355 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 ZSWIM3Q96MP5 696 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 XPO4Q9C0E2 1151 aaKnown RBP28.23■■■□□ 2.11
CCM2-211ENST00000478582 RBSNQ9H1K0 784 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 SCML2Q9UQR0 700 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 ZDBF2Q9HCK1 2354 aa28.23■■■□□ 2.11
CCM2-211ENST00000478582 ZNF840PA6NDX5 716 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 CFHP08603 1231 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 ZDHHC11BP0C7U3 371 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 CYP11B1P15538 503 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 VCPP55072 806 aaKnown RBP28.22■■■□□ 2.11
CCM2-211ENST00000478582 IFRD2Q12894 506 aaPredicted RBP28.22■■■□□ 2.11
CCM2-211ENST00000478582 STXBP5Q5T5C0 1151 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 STK32AQ8WU08 396 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 HSFY1Q96LI6 401 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 NUP58Q9BVL2 599 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 SLC46A2Q9BY10 475 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 TTYH3Q9C0H2 523 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 MFSD1Q9H3U5 465 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 TRPV4Q9HBA0 871 aa28.22■■■□□ 2.11
CCM2-211ENST00000478582 PFKLP17858 780 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 RPL34P49207 117 aaKnown RBP28.21■■■□□ 2.11
CCM2-211ENST00000478582 IER5LQ5T953 404 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 DENND1BQ6P3S1 775 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 CCDC186Q7Z3E2 898 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 DDX1Q92499 740 aaKnown RBP28.21■■■□□ 2.11
CCM2-211ENST00000478582 BAP1Q92560 729 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 SMARCD2Q92925 531 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 IQCDQ96DY2 449 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 FAM122AQ96E09 287 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 ASB16Q96NS5 453 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 LHX5Q9H2C1 402 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 SLC2A4RGQ9NR83 387 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 KMT2EQ8IZD2 1858 aa28.21■■■□□ 2.11
CCM2-211ENST00000478582 MYH10P35580 1976 aa28.2■■■□□ 2.11
CCM2-211ENST00000478582 GFPT2O94808 682 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 KRT9P35527 623 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 PLA2G5P39877 138 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 FAM78AQ5JUQ0 283 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 TXNDC8Q6A555 127 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 PMF1Q6P1K2 205 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 SARM1Q6SZW1 724 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 SIX5Q8N196 739 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 SCML4Q8N228 414 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 ZSCAN18Q8TBC5 510 aaPredicted RBP28.2■■■□□ 2.1
CCM2-211ENST00000478582 PRRX2Q99811 253 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 SLITRK6Q9H5Y7 841 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 LRRC4Q9HBW1 653 aa28.2■■■□□ 2.1
CCM2-211ENST00000478582 CHORDC1Q9UHD1 332 aaPredicted RBP28.2■■■□□ 2.1
CCM2-211ENST00000478582 PDE6CP51160 858 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 CLCN5P51795 746 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 TKTL1P51854 596 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 PM20D1Q6GTS8 502 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 ASTLQ6HA08 431 aaPredicted RBP28.19■■■□□ 2.1
CCM2-211ENST00000478582 ZNF677Q86XU0 584 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 FMNL3Q8IVF7 1028 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 CMTM8Q8IZV2 173 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 MAB21L3Q8N8X9 362 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 EPS8L1Q8TE68 723 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 GMIPQ9P107 970 aa28.19■■■□□ 2.1
CCM2-211ENST00000478582 ZNF638Q14966 1978 aaKnown RBP28.19■■■□□ 2.1
CCM2-211ENST00000478582 ITIH6Q6UXX5 1313 aa28.18■■■□□ 2.1
CCM2-211ENST00000478582 DENND4CQ5VZ89 1909 aa28.18■■■□□ 2.1
CCM2-211ENST00000478582 ECI2O75521 394 aa28.18■■■□□ 2.1
CCM2-211ENST00000478582 NOP9Q86U38 636 aaKnown RBP28.18■■■□□ 2.1
CCM2-211ENST00000478582 KXD1Q9BQD3 176 aa28.18■■■□□ 2.1
CCM2-211ENST00000478582 CYLDQ9NQC7 956 aa28.18■■■□□ 2.1
CCM2-211ENST00000478582 TLR8Q9NR97 1041 aaKnown RBP28.18■■■□□ 2.1
CCM2-211ENST00000478582 NOCTQ9UK39 431 aaKnown RBP28.18■■■□□ 2.1
CCM2-211ENST00000478582 OBSL1O75147 1896 aa28.18■■■□□ 2.1
CCM2-211ENST00000478582 A0A1W2PQJ5 194 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 GABBR2O75899 941 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 FCARP24071 287 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 PSEN1P49768 467 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 TUBP50607 506 aa28.17■■■□□ 2.1
CCM2-211ENST00000478582 NUBP1P53384 320 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms