RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CAVIN2O95810 425 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 USP17L7P0C7H9 530 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 RFX1P22670 979 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 ADIGQ0VDE8 80 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 STILQ15468 1287 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 FILIP1LQ4L180 1135 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 DPY19L2P1Q6NXN4 242 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 LCLAT1Q6UWP7 414 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 VITQ6UXI7 678 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 PIGZQ86VD9 579 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 SLC47A2Q86VL8 602 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 MON1AQ86VX9 555 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 PASD1Q8IV76 773 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 YAF2Q8IY57 180 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 UBALD2Q8IYN6 164 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 SIX6OS1Q8N1H7 587 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 RNF214Q8ND24 703 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 PDZD8Q8NEN9 1154 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 NXPE3Q969Y0 559 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 ELSPBP1Q96BH3 223 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 RSPRY1Q96DX4 576 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 NACA2Q9H009 215 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 CCSER2Q9H7U1 834 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 PNPLA8Q9NP80 782 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 PLCB1Q9NQ66 1216 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 ST7Q9NRC1 585 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 CNTN6Q9UQ52 1028 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 SIK3Q9Y2K2 1263 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 MIA3Q5JRA6 1907 aa7.27□□□□□ -1.25
BRCA1-215ENST00000478531 MYOFQ9NZM1 2061 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 A0A1W2PQH9 124 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 F8VZ95 297 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PI4K2BG5E9Z4 385 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SETSIPP0DME0 302 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SRFP11831 508 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 LCP1P13796 627 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PSMC3P17980 439 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 HDCP19113 662 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 GDI1P31150 447 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 CLCN1P35523 988 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PGFP49763 221 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TKTL1P51854 596 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 KIF11P52732 1056 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 GPC5P78333 572 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 FANCCQ00597 558 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PTK2Q05397 1052 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 CNGA2Q16280 664 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TAF3Q5VWG9 929 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 DENND1BQ6P3S1 775 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 ZNF606Q8WXB4 792 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 OVCA2Q8WZ82 227 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 EDAQ92838 391 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 USP13Q92995 863 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 ZFYVE19Q96K21 471 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SPAG5Q96R06 1193 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 NAA15Q9BXJ9 866 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 BRD9Q9H8M2 597 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TRPV4Q9HBA0 871 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 LRRC4Q9HBW1 653 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TLR8Q9NR97 1041 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TDP1Q9NUW8 608 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SMPD4Q9NXE4 827 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 NAGPAQ9UK23 515 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 CA14Q9ULX7 337 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SCML2Q9UQR0 700 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 COL4A2P08572 1712 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 FRYLO94915 3013 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 A0A1B0GTH6 734 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 LRRC10BA6NIK2 292 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SCAMP3O14828 347 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TLR5O60602 858 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 GFPT2O94808 682 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 OAS1P00973 400 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 MBL2P11226 248 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 KRT9P35527 623 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PLA2G4AP47712 749 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PPP3CCP48454 512 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PDE6CP51160 858 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 ARID5AQ03989 594 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SIGLEC14Q08ET2 396 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PKDCCQ504Y2 493 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 HECTD3Q5T447 861 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PMF1Q6P1K2 205 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 CACNA2D4Q7Z3S7 1137 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 FAM71AQ8IYT1 594 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 SIX5Q8N196 739 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 CELF5Q8N6W0 485 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 NDRG1Q92597 394 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 E2F7Q96AV8 911 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 NAP1L5Q96NT1 182 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 LRRC3BQ96PB8 259 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 ERGIC2Q96RQ1 377 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 TRMT61BQ9BVS5 477 aaKnown RBP7.26□□□□□ -1.25
BRCA1-215ENST00000478531 STK33Q9BYT3 514 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 ULBP1Q9BZM6 244 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 PDCL3Q9H2J4 239 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 COMMD8Q9NX08 183 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 IL37Q9NZH6 218 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 ZMYM5Q9UJ78 669 aa7.26□□□□□ -1.25
BRCA1-215ENST00000478531 NUDT5Q9UKK9 219 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms