RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 UPK3BL2E5RIL1 263 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 LAMA5O15230 3695 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 HOXC11O43248 304 aaPredicted RBP13.6□□□□□ -0.23
TDP2-204ENST00000478507 TGFB1I1O43294 461 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 COCHO43405 550 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 STAU1O95793 577 aaKnown RBP13.6□□□□□ -0.23
TDP2-204ENST00000478507 ADH1CP00326 375 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 APODP05090 189 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 ADH5P11766 374 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 PTPN1P18031 435 aaKnown RBP13.6□□□□□ -0.23
TDP2-204ENST00000478507 TNFRSF4P43489 277 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 LMAN2Q12907 356 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 SLC39A14Q15043 492 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 E2F4Q16254 413 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 SNRNP35Q16560 246 aaKnown RBP13.6□□□□□ -0.23
TDP2-204ENST00000478507 EOGTQ5NDL2 527 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 LY6G5CQ5SRR4 150 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 SNX30Q5VWJ9 437 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 DDX42Q86XP3 938 aaKnown RBP eCLIP13.6□□□□□ -0.23
TDP2-204ENST00000478507 CCDC65Q8IXS2 484 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 TMEFF1Q8IYR6 380 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 DEFB124Q8NES8 71 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 USP28Q96RU2 1077 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 MMS19Q96T76 1030 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 B3GNT5Q9BYG0 378 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 PANK2Q9BZ23 570 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 XYLT2Q9H1B5 865 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 CD248Q9HCU0 757 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 POLMQ9NP87 494 aaPredicted RBP13.6□□□□□ -0.23
TDP2-204ENST00000478507 ZDHHC4Q9NPG8 344 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 ARHGEF4Q9NR80 690 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 IL37Q9NZH6 218 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 TBC1D14Q9P2M4 693 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 PILRBQ9UKJ0 227 aa13.6□□□□□ -0.23
TDP2-204ENST00000478507 FAM92AA1XBS5 289 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.59□□□□□ -0.23
TDP2-204ENST00000478507 CLDN5O00501 218 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 EIF3DO15371 548 aaKnown RBP eCLIP13.59□□□□□ -0.23
TDP2-204ENST00000478507 ZDHHC11BP0C7U3 371 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 ENGP17813 658 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 HOXD12P35452 270 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 CEBPZQ03701 1054 aaKnown RBP13.59□□□□□ -0.23
TDP2-204ENST00000478507 KDSRQ06136 332 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 CYP24A1Q07973 514 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 EHHADHQ08426 723 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 SEMA3BQ13214 749 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 PSMD6Q15008 389 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 TDRD10Q5VZ19 366 aaKnown RBP13.59□□□□□ -0.23
TDP2-204ENST00000478507 CNNM4Q6P4Q7 775 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 HS2ST1Q7LGA3 356 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 B3GALNT2Q8NCR0 500 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 ZNF507Q8TCN5 953 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 HMGB4Q8WW32 186 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 OVCA2Q8WZ82 227 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 ZNF516Q92618 1163 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 OTUB2Q96DC9 234 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 SPACA7Q96KW9 195 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 SLITRK1Q96PX8 696 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 CGRRF1Q99675 332 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 TRIM9Q9C026 710 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 TNMDQ9H2S6 317 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 SNX25Q9H3E2 840 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 AGPAT3Q9NRZ7 376 aa13.59□□□□□ -0.23
TDP2-204ENST00000478507 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
TDP2-204ENST00000478507 FASNP49327 2511 aaKnown RBP13.58□□□□□ -0.23
TDP2-204ENST00000478507 LOC400499M0QZD8 3231 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 TCRBV21S2A2A0A5A6 115 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 GREM1O60565 184 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 ABL1P00519 1130 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 DLATP10515 647 aaKnown RBP13.58□□□□□ -0.24
TDP2-204ENST00000478507 MBL2P11226 248 aaPredicted RBP13.58□□□□□ -0.24
TDP2-204ENST00000478507 GABRG2P18507 467 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 PDCP20941 246 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 SYT1P21579 422 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 ITPKAP23677 461 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 YWHAQP27348 245 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 TUBP50607 506 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 UAP1L1Q3KQV9 507 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 WDR72Q3MJ13 1102 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 LYSMD4Q5XG99 296 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 PAQR9Q6ZVX9 377 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 STXBP4Q6ZWJ1 553 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 ARMCX6Q7L4S7 300 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 TTC30AQ86WT1 665 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 MIB1Q86YT6 1006 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 NUP93Q8N1F7 819 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 PDILTQ8N807 584 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 PDZD8Q8NEN9 1154 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 OR6B3Q8NGW1 331 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 KCNV2Q8TDN2 545 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 WBP2Q969T9 261 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 KCNK16Q96T55 309 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 NUSAP1Q9BXS6 441 aaKnown RBP13.58□□□□□ -0.24
TDP2-204ENST00000478507 CAPN10Q9HC96 672 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 NEUROG3Q9Y4Z2 214 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 NBEAQ8NFP9 2946 aa13.58□□□□□ -0.24
TDP2-204ENST00000478507 ATXN2Q99700 1313 aaKnown RBP13.58□□□□□ -0.24
TDP2-204ENST00000478507 ANKRD11Q6UB99 2663 aaPredicted RBP13.57□□□□□ -0.24
TDP2-204ENST00000478507 CELSR3Q9NYQ7 3312 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms