RNA–Protein interactions for RNA: ENST00000478279.5

APTX-222, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 684 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-222	ENST00000478279	POMGNT1	Q8WZA1	660 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	ZNF419	Q96HQ0	510 aa	Predicted RBP	11.31	□□□□□ -0.6
APTX-222	ENST00000478279	HSPA12B	Q96MM6	686 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	ZDHHC5	Q9C0B5	715 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	ST6GALNAC4	Q9H4F1	302 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	ZHX3	Q9H4I2	956 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	CACNA2D2	Q9NY47	1150 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	TBC1D14	Q9P2M4	693 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	CYP8B1	Q9UNU6	501 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	LIMCH1	Q9UPQ0	1083 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	SNX9	Q9Y5X1	595 aa		11.31	□□□□□ -0.6
APTX-222	ENST00000478279	TENM4	Q6N022	2769 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279		A0A1W2PQF6	199 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	CBFA2T3	O75081	653 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	TBCA	O75347	108 aa	Known RBP	11.3	□□□□□ -0.6
APTX-222	ENST00000478279	ABL1	P00519	1130 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	OAS1	P00973	400 aa	Known RBP	11.3	□□□□□ -0.6
APTX-222	ENST00000478279	GNS	P15586	552 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	BDNF	P23560	247 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	ANXA13	P27216	316 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	WNT7B	P56706	349 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	MAPRE1	Q15691	268 aa	Known RBP	11.3	□□□□□ -0.6
APTX-222	ENST00000478279	SOWAHA	Q2M3V2	549 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	SYCP2L	Q5T4T6	812 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	SCARA3	Q6AZY7	606 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	DPH6	Q7L8W6	267 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	TMPRSS7	Q7RTY8	843 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	BRSK2	Q8IWQ3	736 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	ETFBKMT	Q8IXQ9	262 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	CSGALNACT2	Q8N6G5	542 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	CXorf38	Q8TB03	319 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	FOXJ1	Q92949	421 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	MYLPF	Q96A32	169 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	OTUB2	Q96DC9	234 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	SYT15	Q9BQS2	421 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	DEC1	Q9P2X7	70 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	ITGA11	Q9UKX5	1188 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	PCOLCE2	Q9UKZ9	415 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	HCN2	Q9UL51	889 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	CDH9	Q9ULB4	789 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	STARD13	Q9Y3M8	1113 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	SHROOM3	Q8TF72	1996 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	ZNF462	Q96JM2	2506 aa		11.3	□□□□□ -0.6
APTX-222	ENST00000478279	E2F8	A0AVK6	867 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	TULP1	O00294	542 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	HOXC11	O43248	304 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	TULP3	O75386	442 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	MBL2	P11226	248 aa	Predicted RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	NDUFV2	P19404	249 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	LMO2	P25791	158 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	WAS	P42768	502 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	PSMC1	P62191	440 aa	Known RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	NOP14	P78316	857 aa	Known RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	RBP5	P82980	135 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	TAF10	Q12962	218 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	GRIK2	Q13002	908 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	RILPL1	Q5EBL4	403 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	WDR45B	Q5MNZ6	344 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	C10orf76	Q5T2E6	689 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	BTBD8	Q5XKL5	378 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	LIMS2	Q7Z4I7	341 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	SCUBE3	Q8IX30	993 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	NAT16	Q8N8M0	369 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	TERB1	Q8NA31	727 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	SETD7	Q8WTS6	366 aa	Known RBP	11.29	□□□□□ -0.6
APTX-222	ENST00000478279	CALML4	Q96GE6	196 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	AK8	Q96MA6	479 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	FAM213A	Q9BRX8	229 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	IKZF4	Q9H2S9	585 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	CD248	Q9HCU0	757 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	CRTAC1	Q9NQ79	661 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279	BLOC1S4	Q9NUP1	217 aa		11.29	□□□□□ -0.6
APTX-222	ENST00000478279		A0A087WV48	116 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	TRIM66	O15016	1216 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	NDUFS2	O75306	463 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	KRT19	P08727	400 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	MAOB	P27338	520 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	UBA7	P41226	1012 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	CYP27A1	Q02318	531 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	C19orf57	Q0VDD7	668 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	MCM6	Q14566	821 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	TDRD10	Q5VZ19	366 aa	Known RBP	11.28	□□□□□ -0.6
APTX-222	ENST00000478279	SDE2	Q6IQ49	451 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	ZNF720	Q7Z2F6	126 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	MIB1	Q86YT6	1006 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	SPRYD3	Q8NCJ5	442 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	IPO4	Q8TEX9	1081 aa	Known RBP	11.28	□□□□□ -0.6
APTX-222	ENST00000478279	KBTBD7	Q8WVZ9	684 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	DNASE2B	Q8WZ79	361 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	HVCN1	Q96D96	273 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	C8orf48	Q96LL4	319 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	SLITRK1	Q96PX8	696 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279	RBAK	Q9NYW8	714 aa	Predicted RBP	11.28	□□□□□ -0.6
APTX-222	ENST00000478279	SIX4	Q9UIU6	781 aa		11.28	□□□□□ -0.6
APTX-222	ENST00000478279		A0A1B0GTW7	788 aa		11.27	□□□□□ -0.61
APTX-222	ENST00000478279	TRABD2B	A6NFA1	517 aa		11.27	□□□□□ -0.61
APTX-222	ENST00000478279		F8VP50	259 aa		11.27	□□□□□ -0.61
APTX-222	ENST00000478279	TRIM24	O15164	1050 aa		11.27	□□□□□ -0.61
APTX-222	ENST00000478279	DKK1	O94907	266 aa		11.27	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms