RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 KPNA1P52294 538 aaPredicted RBP16.45■□□□□ 0.22
HMGA1-206ENST00000478214 KIF11P52732 1056 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 SLC7A9P82251 487 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 KCNJ12Q14500 433 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 MTF1Q14872 753 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 STX1AQ16623 288 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 EXOC3L4Q17RC7 722 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 HECTD3Q5T447 861 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 SNX30Q5VWJ9 437 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 TRIM68Q6AZZ1 485 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 TRIM65Q6PJ69 517 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 RBBP8NLQ8NC74 664 aaPredicted RBP16.45■□□□□ 0.22
HMGA1-206ENST00000478214 TFAP2BQ92481 460 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 NDST4Q9H3R1 872 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 CCSER2Q9H7U1 834 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 HPS4Q9NQG7 708 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 ANO10Q9NW15 660 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 KIAA1257Q9ULG3 409 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 SCML2Q9UQR0 700 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 CPQQ9Y646 472 aa16.45■□□□□ 0.22
HMGA1-206ENST00000478214 GTPBP10A4D1E9 387 aaKnown RBP16.44■□□□□ 0.22
HMGA1-206ENST00000478214 LEFTY2O00292 366 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 TULP2O00295 520 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 COCHO43405 550 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 MBL2P11226 248 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-206ENST00000478214 ARSAP15289 507 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 PON1P27169 355 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 ZNF132P52740 706 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 PDE4CQ08493 712 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 VWA3BQ502W6 1294 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 MIIPQ5JXC2 388 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
HMGA1-206ENST00000478214 PIGZQ86VD9 579 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 CCDC105Q8IYK2 499 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 UBA3Q8TBC4 463 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 ZSWIM1Q9BR11 485 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 UBXN6Q9BZV1 441 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 KCNH6Q9H252 994 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 EBF3Q9H4W6 596 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 NMUR1Q9HB89 426 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 TLR8Q9NR97 1041 aaKnown RBP16.44■□□□□ 0.22
HMGA1-206ENST00000478214 OSER1Q9NX31 292 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 DLGAP2Q9P1A6 1054 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 HESX1Q9UBX0 185 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 WNT6Q9Y6F9 365 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 ANAPC1Q9H1A4 1944 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 ZNF638Q14966 1978 aaKnown RBP16.44■□□□□ 0.22
HMGA1-206ENST00000478214 KMT2EQ8IZD2 1858 aa16.44■□□□□ 0.22
HMGA1-206ENST00000478214 COL4A2P08572 1712 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 A0A1W2PQH9 124 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 OTOL1A6NHN0 477 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 MAN2B1O00754 1011 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 GALR2O43603 387 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 KRT5P13647 590 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 TCF3P15923 654 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 BRD2P25440 801 aaKnown RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 TUBP50607 506 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 NUBP1P53384 320 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 BCAT1P54687 386 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 MLLT6P55198 1093 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 SLC8A3P57103 927 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 BST2Q10589 180 aaKnown RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 TCF15Q12870 199 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 ITPRIPL2Q3MIP1 535 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 TCP11X2Q5H9J9 407 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 CAVIN1Q6NZI2 390 aaKnown RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 LCLAT1Q6UWP7 414 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 DTWD2Q8NBA8 298 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 OSCP1Q8WVF1 389 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 FAM3CQ92520 227 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 NELL2Q99435 816 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 PRRX2Q99811 253 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 OSBPL6Q9BZF3 934 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 C8orf33Q9H7E9 229 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 DUS2Q9NX74 493 aaKnown RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 APEX2Q9UBZ4 518 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 NDRG2Q9UN36 371 aaKnown RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 CNTN6Q9UQ52 1028 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 MRPS17Q9Y2R5 130 aaKnown RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 ARIH1Q9Y4X5 557 aaPredicted RBP16.43■□□□□ 0.22
HMGA1-206ENST00000478214 USP3Q9Y6I4 520 aa16.43■□□□□ 0.22
HMGA1-206ENST00000478214 CACNA1HO95180 2353 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 SPECC1L-ADORA2AF8WAN1 911 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 PES1O00541 588 aaKnown RBP16.42■□□□□ 0.22
HMGA1-206ENST00000478214 SCAMP3O14828 347 aaKnown RBP16.42■□□□□ 0.22
HMGA1-206ENST00000478214 XPO1O14980 1071 aaKnown RBP16.42■□□□□ 0.22
HMGA1-206ENST00000478214 TLR5O60602 858 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 TBX18O95935 607 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 EEF1GP26641 437 aaKnown RBP16.42■□□□□ 0.22
HMGA1-206ENST00000478214 CTHP32929 405 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 IFNAR2P48551 515 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 MFAP3P55082 362 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 TYRO3Q06418 890 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 RUNX3Q13761 415 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 PDGFRLQ15198 375 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 CNGA2Q16280 664 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 ARHGAP44Q17R89 818 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 PKDCCQ504Y2 493 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 RAB41Q5JT25 222 aa16.42■□□□□ 0.22
HMGA1-206ENST00000478214 CDKAL1Q5VV42 579 aa16.42■□□□□ 0.22
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