RNA–Protein interactions for RNA: ENST00000478188.5

POLR2B-208, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2

Gene POLR2B, Length 3,093 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-208ENST00000478188 FAM83CQ9BQN1 747 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 NIF3L1Q9GZT8 377 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 HSD3B7Q9H2F3 369 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 TASP1Q9H6P5 420 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 CYP3A43Q9HB55 503 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 SIX2Q9NPC8 291 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 PRMT8Q9NR22 394 aaPredicted RBP4.51□□□□□ -1.69
POLR2B-208ENST00000478188 ARHGEF3Q9NR81 526 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 OSER1Q9NX31 292 aa4.51□□□□□ -1.69
POLR2B-208ENST00000478188 AJAP1Q9UKB5 411 aaPredicted RBP4.51□□□□□ -1.69
POLR2B-208ENST00000478188 C2orf78A6NCI8 922 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 HEPACAM2A8MVW5 462 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KIF20AO95235 890 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PDGFRBP09619 1106 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 MYL4P12829 197 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CCDC130P13994 396 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 BDNFP23560 247 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 DDX6P26196 483 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■■□□□ 12.1
POLR2B-208ENST00000478188 TARSP26639 723 aaKnown RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CDC25CP30307 473 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ELF1P32519 619 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GNL1P36915 607 aaPredicted RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 FKBP3Q00688 224 aaKnown RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PRKCQQ04759 706 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ORC1Q13415 861 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GAS6Q14393 721 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GRM2Q14416 872 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 AGERQ15109 404 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 MGAT5BQ3V5L5 792 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ARHGAP17Q68EM7 881 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KRT39Q6A163 491 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 SCARA5Q6ZMJ2 495 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CLEC20AQ6ZU45 233 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ITIH5Q86UX2 942 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 BPHLQ86WA6 291 aaPredicted RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CMTM8Q8IZV2 173 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 SIX5Q8N196 739 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PHTF2Q8N3S3 785 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KIAA1958Q8N8K9 716 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 DEPDC1BQ8WUY9 529 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 NELFBQ8WX92 580 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 WBP2Q969T9 261 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PBXIP1Q96AQ6 731 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 HNRNPABQ99729 332 aaKnown RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GTPBP4Q9BZE4 634 aaKnown RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 OSBPL6Q9BZF3 934 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 SMG9Q9H0W8 520 aaKnown RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 TBC1D17Q9HA65 648 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PRM3Q9NNZ6 103 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CA14Q9ULX7 337 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CTNND2Q9UQB3 1225 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 FRMD4BQ9Y2L6 1034 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 USP3Q9Y6I4 520 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 MYOFQ9NZM1 2061 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ZNF840PA6NDX5 716 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 F8VP50 259 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 RNF225M0QZC1 329 aaPredicted RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GFRA2O00451 464 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CHADO15335 359 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 SMC2O95347 1197 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CSH1P0DML2 217 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CSH2P0DML3 217 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PFKLP17858 780 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PIK3CAP42336 1068 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ALDH1A3P47895 512 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 FMO5P49326 533 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 SLC7A9P82251 487 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ZNF667Q5HYK9 610 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 MIIPQ5JXC2 388 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GPR158Q5T848 1215 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 TXNDC11Q6PKC3 985 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 TTC30AQ86WT1 665 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ARID3BQ8IVW6 561 aaPredicted RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 ARHGEF19Q8IW93 802 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 C12orf29Q8N999 325 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 NOC3LQ8WTT2 800 aaKnown RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 OVCA2Q8WZ82 227 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KAT5Q92993 513 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KREMEN1Q96MU8 473 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KCNK16Q96T55 309 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 FOXQ1Q9C009 403 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 GPR88Q9GZN0 384 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 RNF38Q9H0F5 515 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 PNPLA8Q9NP80 782 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 LTB4R2Q9NPC1 389 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 COMMD8Q9NX08 183 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 RAB20Q9NX57 234 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 MAGEC2Q9UBF1 373 aaPredicted RBP4.5□□□□□ -1.69
POLR2B-208ENST00000478188 RWDD2AQ9UIY3 292 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 CKAP5Q14008 2032 aa4.5□□□□□ -1.69
POLR2B-208ENST00000478188 KINO60870 393 aaKnown RBP4.49□□□□□ -1.69
POLR2B-208ENST00000478188 KRT37O76014 449 aa4.49□□□□□ -1.69
POLR2B-208ENST00000478188 PSMC3P17980 439 aa4.49□□□□□ -1.69
POLR2B-208ENST00000478188 RPL13P26373 211 aaKnown RBP4.49□□□□□ -1.69
POLR2B-208ENST00000478188 PPP1R2P41236 205 aa4.49□□□□□ -1.69
POLR2B-208ENST00000478188 MXI1P50539 228 aa4.49□□□□□ -1.69
POLR2B-208ENST00000478188 WDR4P57081 412 aaKnown RBP4.49□□□□□ -1.69
POLR2B-208ENST00000478188 RPL10AP62906 217 aaKnown RBP4.49□□□□□ -1.69
POLR2B-208ENST00000478188 TNNC1P63316 161 aa4.49□□□□□ -1.69
POLR2B-208ENST00000478188 MAPRE1Q15691 268 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms