RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 CHRDQ9H2X0 955 aa14.63□□□□□ -0.07
SOX2-OT-208ENST00000477928 LMBRD1Q9NUN5 540 aa14.63□□□□□ -0.07
SOX2-OT-208ENST00000477928 SMPD4Q9NXE4 827 aa14.63□□□□□ -0.07
SOX2-OT-208ENST00000477928 IL37Q9NZH6 218 aa14.63□□□□□ -0.07
SOX2-OT-208ENST00000477928 TRPM5Q9NZQ8 1165 aa14.63□□□□□ -0.07
SOX2-OT-208ENST00000477928 TRAV19A0A0A6YYK7 116 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 FAM92AA1XBS5 289 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 ZNF840PA6NDX5 716 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 TNFRSF10BO14763 440 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 NCAM2O15394 837 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 AP1G2O75843 785 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 ABL1P00519 1130 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 USP17L7P0C7H9 530 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 TDGF1P13385 188 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 ERCC5P28715 1186 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 SLC5A3P53794 718 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 SATB1Q01826 763 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 MTF1Q14872 753 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 CAMK4Q16566 473 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 ITPRIPL2Q3MIP1 535 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 SNX30Q5VWJ9 437 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 TRIM59Q8IWR1 403 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 NKD2Q969F2 451 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 WBP2Q969T9 261 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 FAM81BQ96LP2 452 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 IER2Q9BTL4 223 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 FBXO44Q9H4M3 255 aa14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 C8orf33Q9H7E9 229 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 PRMT8Q9NR22 394 aaPredicted RBP14.62□□□□□ -0.07
SOX2-OT-208ENST00000477928 KIF26AQ9ULI4 1882 aaPredicted RBP14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 GVINP1Q7Z2Y8 2422 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 FAM200BP0CF97 657 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 HDCP19113 662 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 YWHAQP27348 245 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 TUBP50607 506 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 RUNX3Q13761 415 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 ZNF394Q53GI3 561 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 FSTL4Q6MZW2 842 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 EZH1Q92800 747 aaPredicted RBP14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 TATDN2Q93075 761 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 FBXO32Q969P5 355 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 SRRTQ9BXP5 876 aaKnown RBP14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 UBXN6Q9BZV1 441 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 CISHQ9NSE2 258 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 GMIPQ9P107 970 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 CHORDC1Q9UHD1 332 aaPredicted RBP14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 KIAA1257Q9ULG3 409 aa14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.61□□□□□ -0.07
SOX2-OT-208ENST00000477928 MIA3Q5JRA6 1907 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 CACNA1IQ9P0X4 2223 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 LEFTY2O00292 366 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 OLFM2O95897 454 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 OAS1P00973 400 aaKnown RBP14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 MAP3K7CLP57077 242 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 AMPD2Q01433 879 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 MESP2Q0VG99 397 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 KCNH2Q12809 1159 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 CUL2Q13617 745 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 CCINQ13939 588 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 ARHGAP17Q68EM7 881 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 RALGPS2Q86X27 583 aaPredicted RBP14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 FAM114A1Q8IWE2 563 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 SFTPA1Q8IWL2 248 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 CYFIP2Q96F07 1278 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 TMEM176AQ96HP8 235 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 NT5C1BQ96P26 610 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 CCSER2Q9H7U1 834 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 DUS2Q9NX74 493 aaKnown RBP14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 ARHGAP26Q9UNA1 814 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 CPQQ9Y646 472 aa14.6□□□□□ -0.07
SOX2-OT-208ENST00000477928 PATJQ8NI35 1801 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 RIF1Q5UIP0 2472 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 HHLA1C9JL84 531 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 COCHO43405 550 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 MBD3O95983 291 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 EGFP01133 1207 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 AFPP02771 609 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 SLC8A3P57103 927 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 SLC7A9P82251 487 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 GCNT1Q02742 428 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 SRSF5Q13243 272 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 GAB4Q2WGN9 574 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 EML3Q32P44 896 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 RBM43Q6ZSC3 357 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 CLEC20AQ6ZU45 233 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 DCLK2Q8N568 766 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 OSCP1Q8WVF1 389 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 EXOC4Q96A65 974 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 ZFRQ96KR1 1074 aaKnown RBP14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 DUSP16Q9BY84 665 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 THAP9Q9H5L6 903 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 ECT2Q9H8V3 914 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 FBXO4Q9UKT5 387 aa14.59□□□□□ -0.07
SOX2-OT-208ENST00000477928 GTPBP10A4D1E9 387 aaKnown RBP14.58□□□□□ -0.08
SOX2-OT-208ENST00000477928 CYP26A1O43174 497 aa14.58□□□□□ -0.08
SOX2-OT-208ENST00000477928 CALCAP01258 141 aa14.58□□□□□ -0.08
SOX2-OT-208ENST00000477928 PAEPP09466 180 aa14.58□□□□□ -0.08
SOX2-OT-208ENST00000477928 ZDHHC11BP0C7U3 371 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms