RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 TAF4BQ92750 862 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SEMA4DQ92854 862 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 NKD2Q969F2 451 aaPredicted RBP8.79□□□□□ -1
ERCC8-205ENST00000477893 FBXO32Q969P5 355 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SMARCD1Q96GM5 515 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SPATA17Q96L03 361 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 C8orf48Q96LL4 319 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 MYRFLQ96LU7 910 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 TIGD1Q96MW7 591 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 ARID3AQ99856 593 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 HINFPQ9BQA5 517 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 SLC6A16Q9GZN6 736 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 NIF3L1Q9GZT8 377 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 TMEM8AQ9HCN3 771 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 DMAP1Q9NPF5 467 aaPredicted RBP8.79□□□□□ -1
ERCC8-205ENST00000477893 HPS4Q9NQG7 708 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 DUS2Q9NX74 493 aaKnown RBP8.79□□□□□ -1
ERCC8-205ENST00000477893 OBP2AQ9NY56 170 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 GMIPQ9P107 970 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 CPQQ9Y646 472 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 OBSL1O75147 1896 aa8.79□□□□□ -1
ERCC8-205ENST00000477893 VPS13AQ96RL7 3174 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 ZNF840PA6NDX5 716 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 PRR23AA6NEV1 266 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 OTOL1A6NHN0 477 aaPredicted RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 SLC16A3O15427 465 aaKnown RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 BEST1O76090 585 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 FAM200BP0CF97 657 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 IRF1P10914 325 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 MBL2P11226 248 aaPredicted RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 YWHAQP27348 245 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 NBL1P41271 181 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 USP4Q13107 963 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 RUNX3Q13761 415 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 ZNF77Q15935 545 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 CCDC40Q4G0X9 1142 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 CBWD6Q4V339 395 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 WDR44Q5JSH3 913 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 CBWD3Q5JTY5 395 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 CBWD5Q5RIA9 395 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 LCE2CQ5TA81 110 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 PAQR9Q6ZVX9 377 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 GPRIN1Q7Z2K8 1008 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 MAML2Q8IZL2 1156 aaPredicted RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 NUP93Q8N1F7 819 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 FBXL13Q8NEE6 735 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 NELFBQ8WX92 580 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 SLITRK1Q96PX8 696 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 NELL2Q99435 816 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 SMOQ99835 787 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 OSBPL6Q9BZF3 934 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 NACA2Q9H009 215 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 C8orf33Q9H7E9 229 aaPredicted RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 KIF9Q9HAQ2 790 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 TRPV5Q9NQA5 729 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 CHMP5Q9NZZ3 219 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 GCNT4Q9P109 453 aa8.78□□□□□ -1
ERCC8-205ENST00000477893 ARMCX3Q9UH62 379 aaPredicted RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 CHORDC1Q9UHD1 332 aaPredicted RBP8.78□□□□□ -1
ERCC8-205ENST00000477893 LEFTY2O00292 366 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CYP26A1O43174 497 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 STX10O60499 249 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 AVPP01185 164 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 FAM163BP0C2L3 166 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CHRNB1P11230 501 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 TRIM21P19474 475 aaKnown RBP8.77□□□□□ -1.01
ERCC8-205ENST00000477893 BMP6P22004 513 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 WEE1P30291 646 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 HOXC13P31276 330 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 FKBP3Q00688 224 aaKnown RBP8.77□□□□□ -1.01
ERCC8-205ENST00000477893 SATB1Q01826 763 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 LRRC63Q05C16 580 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 FZD5Q13467 585 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 LRRC32Q14392 662 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 ZNF268Q14587 947 aaPredicted RBP8.77□□□□□ -1.01
ERCC8-205ENST00000477893 PDGFRLQ15198 375 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 FILIP1Q7Z7B0 1213 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 UNC93AQ86WB7 457 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 RALGPS2Q86X27 583 aaPredicted RBP8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CREBRFQ8IUR6 639 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CPA6Q8N4T0 437 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 ZMIZ2Q8NF64 920 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 SPATA20Q8TB22 786 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 OSCP1Q8WVF1 389 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CLDN23Q96B33 292 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CHFRQ96EP1 664 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CYFIP2Q96F07 1278 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 HEXIM2Q96MH2 286 aaKnown RBP8.77□□□□□ -1.01
ERCC8-205ENST00000477893 FAM83CQ9BQN1 747 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 TTLL2Q9BWV7 592 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 NT5C1AQ9BXI3 368 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 RNF38Q9H0F5 515 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 LINC00597Q9H2U6 94 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CHRDQ9H2X0 955 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CCSER2Q9H7U1 834 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CISHQ9NSE2 258 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 RAB20Q9NX57 234 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 EHD2Q9NZN4 543 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 CFAP97Q9P2B7 532 aa8.77□□□□□ -1.01
ERCC8-205ENST00000477893 ZMYM5Q9UJ78 669 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms