RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ITGA8P53708 1063 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 BMPR2Q13873 1038 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 CCNIQ14094 377 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 TRIM14Q14142 442 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 PUM3Q15397 648 aaKnown RBP5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNF750Q32MQ0 723 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ZIK1Q3SY52 487 aaPredicted RBP5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNF618Q5T7W0 954 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 GGT6Q6P531 493 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 KCTD20Q7Z5Y7 419 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 GRASPQ7Z6J2 395 aaPredicted RBP5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 KRT73Q86Y46 540 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 RFKQ969G6 155 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ZCWPW1Q9H0M4 648 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 CXorf36Q9H7Y0 433 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 PPCSQ9HAB8 311 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 GBA2Q9HCG7 927 aaPredicted RBP5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ZBTB26Q9HCK0 441 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 NECTIN3Q9NQS3 549 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNHIT2Q9UHR6 403 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 SERTAD3Q9UJW9 196 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 TLK1Q9UKI8 766 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 SH2B3Q9UQQ2 575 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 SSX2IPQ9Y2D8 614 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 ENTPD2Q9Y5L3 495 aa5.45□□□□□ -1.54
SMNDC1-205ENST00000477763 GOLGA6L3A6NEY3 463 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 GCOM1H8Y6P7 765 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 KIAA0355O15063 1070 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 PPM1DO15297 605 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 SLC16A3O15427 465 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 SRGAP2O75044 1071 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 SKAP2O75563 359 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 URI1O94763 535 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 NDST3O95803 873 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ONECUT2O95948 504 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ALDH9A1P49189 494 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 PDE6CP51160 858 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 SOX10P56693 466 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 DHX8Q14562 1220 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ELF2Q15723 593 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 TBCCQ15814 346 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 PLAC9Q5JTB6 97 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 CERCAMQ5T4B2 595 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 FAXCQ5TGI0 409 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 STRIP1Q5VSL9 837 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ERAP2Q6P179 960 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 PRIMA1Q86XR5 153 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNF384Q8TF68 577 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ZG16BQ96DA0 208 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 LTV1Q96GA3 475 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNF668Q96K58 619 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 TIMP4Q99727 224 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 GDF15Q99988 308 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 HERPUD2Q9BSE4 406 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 RIOX1Q9H6W3 641 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 RGL1Q9NZL6 768 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 TMOD4Q9NZQ9 345 aa5.44□□□□□ -1.54
SMNDC1-205ENST00000477763 FAM234BA2RU67 622 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 MGST3O14880 152 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 NUDT3O95989 172 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 ZFXP17010 805 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 WT1P19544 449 aaPredicted RBP5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 GABRB3P28472 473 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 ATICP31939 592 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 MAPKAPK3Q16644 382 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 PTCHD3Q3KNS1 767 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 CCDC38Q502W7 563 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 ANO1Q5XXA6 986 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 ARL6IP4Q66PJ3 421 aaKnown RBP5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 CRTC1Q6UUV9 634 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 CERS3Q8IU89 383 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 GLIS1Q8NBF1 620 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 DNAJB14Q8TBM8 379 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 OSCP1Q8WVF1 389 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 FAM227BQ96M60 508 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 CHMP4AQ9BY43 222 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 HPSEQ9Y251 543 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 KAT6AQ92794 2004 aa5.43□□□□□ -1.54
SMNDC1-205ENST00000477763 CD3EAPO15446 510 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 SNX2O60749 519 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 TTLL1O95922 423 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 CSF1RP07333 972 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 EPHA3P29320 983 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 ATXN1P54253 815 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 BCAT1P54687 386 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 KRTAP1-1Q07627 177 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 BLMHQ13867 455 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 KCNAB1Q14722 419 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 RAB30Q15771 203 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 ZACNQ401N2 412 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNF362Q5T0B9 420 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 MANEALQ5VSG8 457 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 MRNIPQ6NTE8 343 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 CCDC174Q6PII3 467 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 KIAA0408Q6ZU52 694 aa5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 ZNF551Q7Z340 670 aaPredicted RBP5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 FAM98AQ8NCA5 519 aaKnown RBP5.42□□□□□ -1.54
SMNDC1-205ENST00000477763 ATG4AQ8WYN0 398 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms