RNA–Protein interactions for RNA: ENST00000477693.1

NIFK-205, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

TSL 1 (best)

Gene NIFK, Length 1,096 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-205ENST00000477693 TMEM30AQ9NV96 361 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 ZMYM5Q9UJ78 669 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 PTPRDP23468 1912 aa10.37□□□□□ -0.75
NIFK-205ENST00000477693 SSU72P8A0A1W2PR75 194 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 PRR33A8MZF0 331 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 CLDN5O00501 218 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 CCP110O43303 1012 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 TADA3O75528 432 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 NUDT7P0C024 238 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 SRFP11831 508 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 CD58P19256 250 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 PRKCIP41743 596 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 ORC1Q13415 861 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 CUL2Q13617 745 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 ARHGAP15Q53QZ3 475 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 FAM78AQ5JUQ0 283 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 STXBP5Q5T5C0 1151 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 PHLDB3Q6NSJ2 640 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 DENND5BQ6ZUT9 1274 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 RRAGAQ7L523 313 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 VPS36Q86VN1 386 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 UBR7Q8N806 425 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 C12orf29Q8N999 325 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 STKLD1Q8NE28 680 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 ZSCAN18Q8TBC5 510 aaPredicted RBP10.36□□□□□ -0.75
NIFK-205ENST00000477693 SLC2A14Q8TDB8 520 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 CPLX3Q8WVH0 158 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 BAP1Q92560 729 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 SMARCD2Q92925 531 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 HNRNPABQ99729 332 aaKnown RBP10.36□□□□□ -0.75
NIFK-205ENST00000477693 RPP25Q9BUL9 199 aaKnown RBP10.36□□□□□ -0.75
NIFK-205ENST00000477693 TTLL2Q9BWV7 592 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 SLITRK6Q9H5Y7 841 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 TASP1Q9H6P5 420 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 ZFP14Q9HCL3 533 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 CSNK1G1Q9HCP0 422 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 SIX2Q9NPC8 291 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 UBE2TQ9NPD8 197 aaPredicted RBP10.36□□□□□ -0.75
NIFK-205ENST00000477693 DMAP1Q9NPF5 467 aaPredicted RBP10.36□□□□□ -0.75
NIFK-205ENST00000477693 CISHQ9NSE2 258 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 EHD2Q9NZN4 543 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 DNAJC12Q9UKB3 198 aa10.36□□□□□ -0.75
NIFK-205ENST00000477693 MAGED2Q9UNF1 606 aaPredicted RBP10.36□□□□□ -0.75
NIFK-205ENST00000477693 TMEM221A6NGB7 291 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 M0R296 226 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 NARSO43776 548 aaKnown RBP10.35□□□□□ -0.75
NIFK-205ENST00000477693 AP1G2O75843 785 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 IPO7O95373 1038 aaKnown RBP10.35□□□□□ -0.75
NIFK-205ENST00000477693 SERPING1P05155 500 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 SKILP12757 684 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 CCDC130P13994 396 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 DDX6P26196 483 aaKnown RBP eCLIP10.35□□□□□ -0.75
NIFK-205ENST00000477693 SOX5P35711 763 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 ADKP55263 362 aaKnown RBP10.35□□□□□ -0.75
NIFK-205ENST00000477693 JAM2P57087 298 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 CYP4F8P98187 520 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 GPR158Q5T848 1215 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 TANGO2Q6ICL3 276 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 PPP1R2P3Q6NXS1 205 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 BMP8AQ7Z5Y6 402 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 ZNF687Q8N1G0 1237 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 PPM1KQ8N3J5 372 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 SLC4A11Q8NBS3 891 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 SHC3Q92529 594 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 E2F7Q96AV8 911 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 CYFIP2Q96F07 1278 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 TMEM176AQ96HP8 235 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 KCNK16Q96T55 309 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 KXD1Q9BQD3 176 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 MED10Q9BTT4 135 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 LUC7LQ9NQ29 371 aaKnown RBP10.35□□□□□ -0.75
NIFK-205ENST00000477693 SLC2A4RGQ9NR83 387 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 KRT82Q9NSB4 513 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 FAM49BQ9NUQ9 324 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 CNTN6Q9UQ52 1028 aa10.35□□□□□ -0.75
NIFK-205ENST00000477693 F8VZ95 297 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 TNFRSF10BO14763 440 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
NIFK-205ENST00000477693 FAM200BP0CF97 657 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 ACO1P21399 889 aaKnown RBP10.34□□□□□ -0.75
NIFK-205ENST00000477693 CYLC1P35663 651 aaPredicted RBP10.34□□□□□ -0.75
NIFK-205ENST00000477693 PPP3CCP48454 512 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 RAD23BP54727 409 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 USP46P62068 366 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 KRT83P78385 493 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 RAPGEF1Q13905 1077 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 DRAP1Q14919 205 aaPredicted RBP10.34□□□□□ -0.75
NIFK-205ENST00000477693 ASIC2Q16515 512 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 ZNF394Q53GI3 561 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 C10orf76Q5T2E6 689 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 PPP1R26Q5T8A7 1209 aaPredicted RBP10.34□□□□□ -0.75
NIFK-205ENST00000477693 ARHGAP17Q68EM7 881 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 VITQ6UXI7 678 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 ZNF677Q86XU0 584 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 ARID3BQ8IVW6 561 aaPredicted RBP10.34□□□□□ -0.75
NIFK-205ENST00000477693 FAM71AQ8IYT1 594 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 CMTM8Q8IZV2 173 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 NUP93Q8N1F7 819 aa10.34□□□□□ -0.75
NIFK-205ENST00000477693 ZMIZ2Q8NF64 920 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms