RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 DNAJB4Q9UDY4 337 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 NR2E1Q9Y466 385 aa5.16□□□□□ -1.58
CKS1B-207ENST00000477676 ANK1P16157 1881 aa5.15□□□□□ -1.58
CKS1B-207ENST00000477676 PDCD11Q14690 1871 aaKnown RBP5.15□□□□□ -1.58
CKS1B-207ENST00000477676 KIF26AQ9ULI4 1882 aaPredicted RBP5.15□□□□□ -1.58
CKS1B-207ENST00000477676 BAHCC1Q9P281 2608 aa5.15□□□□□ -1.58
CKS1B-207ENST00000477676 MED19A0JLT2 244 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 SMCO2A6NFE2 343 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 CCDC69A6NI79 296 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 F8W810 466 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 IPO5O00410 1097 aaKnown RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 FUCA1P04066 466 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 EPHX1P07099 455 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 GALTP07902 379 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 CTSAP10619 480 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 DARSP14868 501 aaKnown RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 AOC1P19801 751 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 MTHFRP42898 656 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 SLC11A1P49279 550 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 CLCN5P51795 746 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 ADCY7P51828 1080 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 NAPAP54920 295 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 FANCCQ00597 558 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 ITIH3Q06033 890 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 SMC1AQ14683 1233 aaKnown RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 ICAM4Q14773 271 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 PTPN14Q15678 1187 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 ADCK5Q3MIX3 580 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF394Q53GI3 561 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 FAM26FQ5R3K3 315 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 FAM160B1Q5W0V3 765 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 CASC1Q6TDU7 716 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 TAS1R1Q7RTX1 841 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF280BQ86YH2 543 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 LINC00482Q8N8I6 264 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 TDRD5Q8NAT2 981 aaKnown RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 KYQ8NBH2 561 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 RNF169Q8NCN4 708 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 RUFY2Q8WXA3 655 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 SEC14L1Q92503 715 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 NKD2Q969F2 451 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 RMDN1Q96DB5 314 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 IGSF21Q96ID5 467 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 NECTIN4Q96NY8 510 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 SH2D3AQ9BRG2 576 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 NRDE2Q9H7Z3 1164 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 TBC1D13Q9NVG8 400 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 GABBR1Q9UBS5 961 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 CGGBP1Q9UFW8 167 aaPredicted RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 PUF60Q9UHX1 559 aaKnown RBP5.15□□□□□ -1.59
CKS1B-207ENST00000477676 AKT3Q9Y243 479 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 LOC400499M0QZD8 3231 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 EML5Q05BV3 1969 aa5.15□□□□□ -1.59
CKS1B-207ENST00000477676 COL4A2P08572 1712 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 FREM2Q5SZK8 3169 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 BPTFQ12830 3046 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 IGKV6-21A0A0C4DH24 114 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 FSD2A1L4K1 749 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 MROH6A6NGR9 719 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 SCAMP3O14828 347 aaKnown RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ZC3H11AO75152 810 aaKnown RBP eCLIP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 OFD1O75665 1012 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 DDHD2O94830 711 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 FOSP01100 380 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 NTRK1P04629 796 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CNPP09543 421 aaKnown RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CALM1P0DP23 149 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CALM2P0DP24 149 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CALM3P0DP25 149 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 MYBP10242 640 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CPA1P15085 419 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 GLULP15104 373 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 TCF3P15923 654 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 VAMP1P23763 118 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 RPL13P26373 211 aaKnown RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CIITAP33076 1130 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 PPM1AP35813 382 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ID4P47928 161 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CLCN4P51793 760 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF143P52747 638 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 PRKCEQ02156 737 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 KRT17Q04695 432 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ANGPT1Q15389 498 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CES5AQ6NT32 575 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 MIS18BP1Q6P0N0 1132 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 B3GNT9Q6UX72 402 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CD300LDQ6UXZ3 194 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 GPR149Q86SP6 731 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 DDX53Q86TM3 631 aaKnown RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CCDC105Q8IYK2 499 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 TMTC2Q8N394 836 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ST13P5Q8NFI4 369 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 TNPO1Q92973 898 aaKnown RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 LCORQ96JN0 433 aaPredicted RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 KLHL5Q96PQ7 755 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 MYADMQ96S97 322 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 CDK5RAP1Q96SZ6 601 aaKnown RBP5.14□□□□□ -1.59
CKS1B-207ENST00000477676 ZNF577Q9BSK1 485 aa5.14□□□□□ -1.59
CKS1B-207ENST00000477676 UNC45AQ9H3U1 944 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms