RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 OSCP1Q8WVF1 389 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 JPH3Q8WXH2 748 aaPredicted RBP5.05□□□□□ -1.6
UBR3-209ENST00000477461 JDP2Q8WYK2 163 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 NT5C1BQ96P26 610 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 PCGF6Q9BYE7 350 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 PRSS22Q9GZN4 317 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 ZNF180Q9UJW8 692 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 STXBP5LQ9Y2K9 1186 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 ZNF518AQ6AHZ1 1483 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 ADGBQ8N7X0 1667 aa5.05□□□□□ -1.6
UBR3-209ENST00000477461 SPAG9O60271 1321 aaKnown RBP5.04□□□□□ -1.6
UBR3-209ENST00000477461 ADAMTS3O15072 1205 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 ERC2O15083 957 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 AP1G1O43747 822 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 CSF1RP07333 972 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 CT47B1P0C2W7 299 aaPredicted RBP5.04□□□□□ -1.6
UBR3-209ENST00000477461 VIPR2P41587 438 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 LRRC41Q15345 812 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 ATAT1Q5SQI0 421 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 IFIT1BQ5T764 474 aaKnown RBP5.04□□□□□ -1.6
UBR3-209ENST00000477461 CAND1Q86VP6 1230 aaKnown RBP5.04□□□□□ -1.6
UBR3-209ENST00000477461 GALNT16Q8N428 558 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 DNAJC5GQ8N7S2 189 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 RAPGEF4Q8WZA2 1011 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 PPP2R3CQ969Q6 453 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 MTFMTQ96DP5 389 aaKnown RBP5.04□□□□□ -1.6
UBR3-209ENST00000477461 CIPCQ9C0C6 399 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 CNNM1Q9NRU3 951 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 TCEAL9Q9UHQ7 104 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 SHANK2Q9UPX8 1470 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 ABCC5O15440 1437 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 C9orf84Q5VXU9 1444 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 POGZQ7Z3K3 1410 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 TRAPPC8Q9Y2L5 1435 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 KDM6BO15054 1643 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 ANKRD30AQ9BXX3 1397 aa5.04□□□□□ -1.6
UBR3-209ENST00000477461 ARHGEF12Q9NZN5 1544 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 MBD5Q9P267 1494 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 PDE6CP51160 858 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 RENBPP51606 427 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 PRKAG1P54619 331 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 E2F1Q01094 437 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 SATB1Q01826 763 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 FHL1Q13642 323 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 FGL2Q14314 439 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 DAZAP2Q15038 168 aaPredicted RBP5.03□□□□□ -1.6
UBR3-209ENST00000477461 PPP2R5AQ15172 486 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 Q4G0T1 1027 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 FAM102BQ5T8I3 360 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 KIRREL2Q6UWL6 708 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 TCEAL8Q8IYN2 117 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 MPP5Q8N3R9 675 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 AFAP1Q8N556 730 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 PRSS3P2Q8NHM4 247 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 MRGPRX1Q96LB2 322 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 LRGUKQ96M69 825 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 SLC12A5Q9H2X9 1139 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 LPAR3Q9UBY5 353 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 SNX14Q9Y5W7 946 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 HECW2Q9P2P5 1572 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 MAST1Q9Y2H9 1570 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 RICTORQ6R327 1708 aa5.03□□□□□ -1.6
UBR3-209ENST00000477461 ATP7AQ04656 1500 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 CYP2D7A0A087X1C5 515 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 TMEM233B4DJY2 109 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 POC1B-GALNT4F8VUJ3 575 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 TSPAN6O43657 245 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 OFD1O75665 1012 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 MYBP10242 640 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 CYP2A6P11509 494 aaPredicted RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 LRPAP1P30533 357 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 NR4A2P43354 598 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 CCT4P50991 539 aaKnown RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 MAPK7Q13164 816 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 CTBP1Q13363 440 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 CYP1B1Q16678 543 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 PTCHD3Q3KNS1 767 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 ZNF260Q3ZCT1 412 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 PLA1AQ53H76 456 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 PXDC1Q5TGL8 231 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 AWAT2Q6E213 333 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 RAVER1Q8IY67 606 aaKnown RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 IZUMO1Q8IYV9 350 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 ABRAQ8N0Z2 381 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 GALNT4Q8N4A0 578 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 NANOGP1Q8N7R0 232 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 SOCS4Q8WXH5 440 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 C1GALT1C1Q96EU7 318 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 THAP7Q9BT49 309 aaPredicted RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 MS4A7Q9GZW8 240 aaPredicted RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 GBA2Q9HCG7 927 aaPredicted RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 RRP7BPQ9NSQ0 103 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 TUBA8Q9NY65 449 aaPredicted RBP5.02□□□□□ -1.61
UBR3-209ENST00000477461 RTEL1-TNFRSF6BF6WH68 1400 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 ROCK1Q13464 1354 aa5.02□□□□□ -1.61
UBR3-209ENST00000477461 PLXNC1O60486 1568 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 KDM5CP41229 1560 aa5.01□□□□□ -1.61
UBR3-209ENST00000477461 INO80Q9ULG1 1556 aaPredicted RBP5.01□□□□□ -1.61
UBR3-209ENST00000477461 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms