RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	ATP11B	Q9Y2G3	1177 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DDX49	Q9Y6V7	483 aa	Known RBP	4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZSWIM8	A7E2V4	1837 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CEP350	Q5VT06	3117 aa		4.99	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	EMSY	Q7Z589	1322 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NRCAM	Q92823	1304 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ARHGEF35	A5YM69	484 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	WNT9A	O14904	365 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MAGEB2	O15479	319 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SLC37A4	O43826	429 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PQBP1	O60828	265 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PPP6R2	O75170	966 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PSMD10	O75832	226 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PARN	O95453	639 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KRT18	P05783	430 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MARK3	P27448	753 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	IGBP1	P78318	339 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ATP2C1	P98194	919 aa	Predicted RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CDC42EP1	Q00587	391 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	AMPD3	Q01432	767 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SP2	Q02086	613 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NCBP1	Q09161	790 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DBP	Q10586	325 aa	Predicted RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PPFIA1	Q13136	1202 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ITGB3BP	Q13352	177 aa	Predicted RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	USP10	Q14694	798 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	XKR9	Q5GH70	373 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	XKR3	Q5GH77	459 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TAF2	Q6P1X5	1199 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ABHD15	Q6UXT9	468 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SLC39A5	Q6ZMH5	540 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SPATC1	Q76KD6	591 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ETNPPL	Q8TBG4	499 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	AFAP1L1	Q8TED9	768 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TCP11	Q8WWU5	503 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CCDC47	Q96A33	483 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NEIL1	Q96FI4	390 aa	Predicted RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SCLT1	Q96NL6	688 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	GBP4	Q96PP9	640 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	UIMC1	Q96RL1	719 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MAP7D2	Q96T17	732 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	EIF2AK1	Q9BQI3	630 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SPATA9	Q9BWV2	254 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SEMA4A	Q9H3S1	761 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	UNC45A	Q9H3U1	944 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KCNMB3	Q9NPA1	279 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	KCNG1	Q9UIX4	513 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	HOOK1	Q9UJC3	728 aa	Known RBP	4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MSRB2	Q9Y3D2	182 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PCDHB6	Q9Y5E3	794 aa		4.98	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SMCHD1	A6NHR9	2005 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	COL1A2	P08123	1366 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	GSTTP1	A0A1W2PQM5	241 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CUTA	O60888	179 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	F2	P00734	622 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	AMY2A	P04746	511 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CLTB	P09497	229 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZNF286B	P0CG31	522 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	XRCC6	P12956	609 aa	Known RBP eCLIP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PTPN1	P18031	435 aa	Known RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	AMY2B	P19961	511 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	RPA1	P27694	616 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MARCKS	P29966	332 aa	Predicted RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	POLG	P54098	1239 aa	Predicted RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PRKCE	Q02156	737 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CYP4A11	Q02928	519 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TOP3A	Q13472	1001 aa	Predicted RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SLC39A14	Q15043	492 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	SMN1	Q16637	294 aa	Known RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	PTGIS	Q16647	500 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MTERF2	Q49AM1	385 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	EARS2	Q5JPH6	523 aa	Known RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	FOXB2	Q5VYV0	432 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	RRAGB	Q5VZM2	374 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	BTBD8	Q5XKL5	378 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CCDC73	Q6ZRK6	1079 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TAX1BP1	Q86VP1	789 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	C4orf19	Q8IY42	314 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CEP57L1	Q8IYX8	460 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	RPUSD2	Q8IZ73	545 aa	Known RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	NME8	Q8N427	588 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	TMEM199	Q8N511	208 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	METTL13	Q8N6R0	699 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CAGE1	Q8TC20	777 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ATP8B4	Q8TF62	1192 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	HAS1	Q92839	578 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LENG9	Q96B70	501 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ZNF669	Q96BR6	464 aa	Predicted RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	DYDC2	Q96IM9	177 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	CEP170P1	Q96L14	293 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	IFT74	Q96LB3	600 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MTMR9	Q96QG7	549 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	USP28	Q96RU2	1077 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	LXN	Q9BS40	222 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	POLR3C	Q9BUI4	534 aa	Predicted RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	INO80B	Q9C086	356 aa	Predicted RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	MTIF3	Q9H2K0	278 aa	Known RBP	4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	ANKEF1	Q9NU02	776 aa		4.97	□□□□□ -1.61
NSMCE4A-208	ENST00000477289	HDAC6	Q9UBN7	1215 aa		4.97	□□□□□ -1.61

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms