RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 O00370 1275 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 GALR2O43603 387 aaPredicted RBP14.17□□□□□ -0.14
ACTN4-205ENST00000477174 SLC9A1P19634 815 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 PSEN1P49768 467 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 KPNA1P52294 538 aaPredicted RBP14.17□□□□□ -0.14
ACTN4-205ENST00000477174 KCNJ12Q14500 433 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 MTF1Q14872 753 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 STILQ15468 1287 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 ZNF77Q15935 545 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 CNGA2Q16280 664 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 STX1AQ16623 288 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 ITPRIPL2Q3MIP1 535 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 TCP11X2Q5H9J9 407 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 LCLAT1Q6UWP7 414 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 GPRIN1Q7Z2K8 1008 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
ACTN4-205ENST00000477174 FAM3CQ92520 227 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 KREMEN1Q96MU8 473 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 FOXQ1Q9C009 403 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 IRF2BPLQ9H1B7 796 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 LTB4R2Q9NPC1 389 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 GTSE1Q9NYZ3 720 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 GMIPQ9P107 970 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 PTPRDP23468 1912 aa14.17□□□□□ -0.14
ACTN4-205ENST00000477174 COCHO43405 550 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 CD72P21854 359 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 PON1P27169 355 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 ZNF132P52740 706 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 BCAT1P54687 386 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 AMPD2Q01433 879 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 BST2Q10589 180 aaKnown RBP14.16□□□□□ -0.14
ACTN4-205ENST00000477174 USP4Q13107 963 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 RUNX3Q13761 415 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 UBXN2BQ14CS0 331 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 GOLGA7BQ2TAP0 167 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 RAB41Q5JT25 222 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 MIIPQ5JXC2 388 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 CCDC186Q7Z3E2 898 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 PIGZQ86VD9 579 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 TTC30AQ86WT1 665 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 DDX42Q86XP3 938 aaKnown RBP eCLIP14.16□□□□□ -0.14
ACTN4-205ENST00000477174 ZNF276Q8N554 614 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 DTWD2Q8NBA8 298 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 RBBP8NLQ8NC74 664 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-205ENST00000477174 RIN3Q8TB24 985 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 OSCP1Q8WVF1 389 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 TFAP2BQ92481 460 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 CLDN23Q96B33 292 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 CYLDQ9NQC7 956 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 DUS2Q9NX74 493 aaKnown RBP14.16□□□□□ -0.14
ACTN4-205ENST00000477174 DLGAP2Q9P1A6 1054 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 TMEM63CQ9P1W3 806 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 APEX2Q9UBZ4 518 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 TSPAN16Q9UKR8 245 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 MTF2Q9Y483 593 aaPredicted RBP14.16□□□□□ -0.14
ACTN4-205ENST00000477174 MUC6Q6W4X9 2439 aa14.16□□□□□ -0.14
ACTN4-205ENST00000477174 LEFTY2O00292 366 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 SLC9A3R1O14745 358 aaPredicted RBP14.15□□□□□ -0.14
ACTN4-205ENST00000477174 XPO1O14980 1071 aaKnown RBP14.15□□□□□ -0.14
ACTN4-205ENST00000477174 TLR5O60602 858 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 SETSIPP0DME0 302 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 MBL2P11226 248 aaPredicted RBP14.15□□□□□ -0.14
ACTN4-205ENST00000477174 MAGEA9P43362 315 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 ZXDBP98169 803 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 TNK2Q07912 1038 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 PDE4CQ08493 712 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 PKDCCQ504Y2 493 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 HSP90AA4PQ58FG1 418 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 CDKAL1Q5VV42 579 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 PM20D1Q6GTS8 502 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 KLHDC10Q6PID8 442 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 CCDC105Q8IYK2 499 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 ZNF687Q8N1G0 1237 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 KCTD13Q8WZ19 329 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 ATP2A3Q93084 1043 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 NACA2Q9H009 215 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 EBF3Q9H4W6 596 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 CCSER2Q9H7U1 834 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 HPS4Q9NQG7 708 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 FANCLQ9NW38 375 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 CLIC5Q9NZA1 410 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 CPQQ9Y646 472 aa14.15□□□□□ -0.14
ACTN4-205ENST00000477174 GREB1Q4ZG55 1949 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 CACNA1HO95180 2353 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 E2F8A0AVK6 867 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 SPECC1L-ADORA2AF8WAN1 911 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 CYP26A1O43174 497 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 DCNP07585 359 aaKnown RBP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 KRT5P13647 590 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 TARSP26639 723 aaKnown RBP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 CTHP32929 405 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 ATP5C1P36542 298 aaKnown RBP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 RPS9P46781 194 aaKnown RBP14.14□□□□□ -0.15
ACTN4-205ENST00000477174 PLA2G4AP47712 749 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 PGFP49763 221 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 PTPN5P54829 565 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 NR1H3Q13133 447 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 FZD5Q13467 585 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 TADA2BQ86TJ2 420 aa14.14□□□□□ -0.15
ACTN4-205ENST00000477174 ARHGAP18Q8N392 663 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms