RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 GMIPQ9P107 970 aa12.39□□□□□ -0.43
VARS2-208ENST00000477052 CIZ1Q9ULV3 898 aaPredicted RBP12.39□□□□□ -0.43
VARS2-208ENST00000477052 TPRP12270 2363 aaKnown RBP12.38□□□□□ -0.43
VARS2-208ENST00000477052 CCDC163A0A0D9SF12 145 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 TRIM24O15164 1050 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 AP1G2O75843 785 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 KLF8O95600 359 aaPredicted RBP12.38□□□□□ -0.43
VARS2-208ENST00000477052 STAU1O95793 577 aaKnown RBP12.38□□□□□ -0.43
VARS2-208ENST00000477052 OLFM2O95897 454 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 ADRB1P08588 477 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 SLFN14P0C7P3 912 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 PRR29P0C7W0 189 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 TCF3P15923 654 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 PFKFB1P16118 471 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 ATICP31939 592 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 SLC5A3P53794 718 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 PLA2G2CQ5R387 149 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 LY6G5CQ5SRR4 150 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 STPG1Q5TH74 334 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 C12orf56Q8IXR9 622 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 FUKQ8N0W3 1084 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 C12orf29Q8N999 325 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 ZMIZ2Q8NF64 920 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 RLN3Q8WXF3 142 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 ACDQ96AP0 544 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 ZC3H10Q96K80 434 aaKnown RBP12.38□□□□□ -0.43
VARS2-208ENST00000477052 ZFRQ96KR1 1074 aaKnown RBP12.38□□□□□ -0.43
VARS2-208ENST00000477052 SLITRK1Q96PX8 696 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 SMOQ99835 787 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 KCTD10Q9H3F6 313 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 KRT82Q9NSB4 513 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 DMAC2Q9NW81 257 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 RCOR1Q9UKL0 485 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 MAPK8IP1Q9UQF2 711 aa12.38□□□□□ -0.43
VARS2-208ENST00000477052 PATE3B3GLJ2 98 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 SGK1O00141 431 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 TNFRSF10BO14763 440 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 KAT7O95251 611 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 TBX18O95935 607 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 NR3C1P04150 777 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 CHRM1P11229 460 aaPredicted RBP12.37□□□□□ -0.43
VARS2-208ENST00000477052 ADH5P11766 374 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 ADORA2BP29275 332 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 PDE6CP51160 858 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 NDST1P52848 882 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 MAP3K7CLP57077 242 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 SNRPFP62306 86 aaKnown RBP12.37□□□□□ -0.43
VARS2-208ENST00000477052 C1orf220Q5T0J3 134 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 GPRIN1Q7Z2K8 1008 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 BBS7Q8IWZ6 715 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 TXNDC5Q8NBS9 432 aaKnown RBP12.37□□□□□ -0.43
VARS2-208ENST00000477052 MDGA1Q8NFP4 955 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 SLC2A14Q8TDB8 520 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 EXOC4Q96A65 974 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 LOXL4Q96JB6 756 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 TWNKQ96RR1 684 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 PNKPQ96T60 521 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 MMRN2Q9H8L6 949 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 NUDT5Q9UKK9 219 aa12.37□□□□□ -0.43
VARS2-208ENST00000477052 LAMA1P25391 3075 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 ACACBO00763 2458 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 CNOT1A5YKK6 2376 aaKnown RBP12.36□□□□□ -0.43
VARS2-208ENST00000477052 TM4SF5O14894 197 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 RTN3O95197 1032 aaPredicted RBP12.36□□□□□ -0.43
VARS2-208ENST00000477052 CAVIN2O95810 425 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 FAM163BP0C2L3 166 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 PDIA4P13667 645 aaKnown RBP12.36□□□□□ -0.43
VARS2-208ENST00000477052 WASP42768 502 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 PPP3CCP48454 512 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 CLDN10P78369 228 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 ELF2Q15723 593 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 CRY1Q16526 586 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 HECTD3Q5T447 861 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 N4BP2L1Q5TBK1 243 aaPredicted RBP12.36□□□□□ -0.43
VARS2-208ENST00000477052 SV2AQ7L0J3 742 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 ARMCX6Q7L4S7 300 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 TMEM25Q86YD3 366 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 IL17RCQ8NAC3 791 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 CEP295NLQ96MC4 621 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 VRTNQ9H8Y1 702 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 DMAP1Q9NPF5 467 aaPredicted RBP12.36□□□□□ -0.43
VARS2-208ENST00000477052 ARHGEF4Q9NR80 690 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 OSER1Q9NX31 292 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
VARS2-208ENST00000477052 EBF1Q9UH73 591 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 CFAP45Q9UL16 551 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 MMP17Q9ULZ9 603 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 ZDHHC9Q9Y397 364 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 EPG5Q9HCE0 2579 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 ATP8B3O60423 1300 aa12.36□□□□□ -0.43
VARS2-208ENST00000477052 BCLAF3A2AJT9 711 aaKnown RBP12.35□□□□□ -0.43
VARS2-208ENST00000477052 SLC9A3R1O14745 358 aaPredicted RBP12.35□□□□□ -0.43
VARS2-208ENST00000477052 GIPC1O14908 333 aa12.35□□□□□ -0.43
VARS2-208ENST00000477052 MDM4O15151 490 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms