RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 ZNF248Q8NDW4 579 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RAD54LQ92698 747 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CDK5RAP1Q96SZ6 601 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 FMO2Q99518 471 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RNF121Q9H920 327 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 NT5MQ9NPB1 228 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 VSTM5A8MXK1 200 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RNF103O00237 685 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 HMGB3O15347 200 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 ADCY6O43306 1168 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RHOBTB3O94955 611 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 PDHA1P08559 390 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CYP2F1P24903 491 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RRM2P31350 389 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 NUDT2P50583 147 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 EIF3BP55884 814 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 COPZ1P61923 177 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 AOX1Q06278 1338 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 GNA13Q14344 377 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CYP51A1Q16850 503 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 KLHL38Q2WGJ6 581 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 ACOT1Q86TX2 421 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 AGBL3Q8NEM8 1001 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 WNK4Q96J92 1243 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 DHRS1Q96LJ7 313 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 ZNF354BQ96LW1 612 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 NDST4Q9H3R1 872 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 METTL5Q9NRN9 209 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 RIMKLBQ9ULI2 386 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 PCDHA7Q9UN72 937 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.92□□□□□ -1.39e-7■■■□□ 16.9
TTC3-215ENST00000476784 IGSF6O95976 241 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RPSAP08865 295 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 CTSOP43234 321 aaPredicted RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 ARSEP51690 589 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 NRG3P56975 720 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 MRPS25P82663 173 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 DRAP1Q14919 205 aaPredicted RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 EPHA7Q15375 998 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CCNG2Q16589 344 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 HDDC2Q7Z4H3 204 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 COL23A1Q86Y22 540 aaPredicted RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 TSPAN14Q8NG11 270 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CALML6Q8TD86 181 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 IL12RB2Q99665 862 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 TCF25Q9BQ70 676 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 SPATA9Q9BWV2 254 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RAB6BQ9NRW1 208 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.92□□□□□ -1.32e-7■□□□□ 8.4
TTC3-215ENST00000476784 LCMT1Q9UIC8 334 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 SOAT2O75908 522 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 PRKAR2AP13861 404 aaKnown RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 ITPKBP27987 946 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 PRKAG1P54619 331 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 PPIGQ13427 754 aaKnown RBP eCLIP6.92□□□□□ -1.38e-7■■□□□ 13.1
TTC3-215ENST00000476784 PEX6Q13608 980 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CUL3Q13618 768 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 LY6KQ17RY6 165 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 MTHFD1LQ6UB35 978 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 USP50Q70EL3 339 aaPredicted RBP6.92□□□□□ -1.3
TTC3-215ENST00000476784 LINC00116Q8NCU8 138 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 UBE2Q2Q8WVN8 375 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 CAPS2Q9BXY5 557 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 PXMP2Q9NR77 195 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 RNF14Q9UBS8 474 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 ANGPTL2Q9UKU9 493 aa6.92□□□□□ -1.3
TTC3-215ENST00000476784 A6NCN8 305 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 RBAK-RBAKDNI3L0D1 243 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 TDP2O95551 362 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 OAS2P29728 719 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 TAP1Q03518 808 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 PUS10Q3MIT2 529 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 LRRC69Q6ZNQ3 347 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 NLRP14Q86W24 1093 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 RASGEF1AQ8N9B8 481 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 THUMPD3Q9BV44 507 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 IMPAD1Q9NX62 359 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 KLHL28Q9NXS3 571 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 SH2B2O14492 632 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 CTIFO43310 598 aaKnown RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 LARGE1O95461 756 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 HNF4AP41235 474 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 ARF5P84085 180 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 NEK10Q6ZWH5 1172 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 CYP4Z1Q86W10 505 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 PRSS58Q8IYP2 241 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 OSBP2Q969R2 916 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 RHOBTB2Q9BYZ6 727 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 DPY30Q9C005 99 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 HCN3Q9P1Z3 774 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 FBXO2Q9UK22 296 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 SOX13Q9UN79 622 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 ENTPD4Q9Y227 616 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 DAGLAQ9Y4D2 1042 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 PCDHB3Q9Y5E6 796 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 MORC2Q9Y6X9 1032 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 SCAMP1O15126 338 aa6.91□□□□□ -1.3
TTC3-215ENST00000476784 CDH2P19022 906 aaPredicted RBP6.91□□□□□ -1.3
TTC3-215ENST00000476784 RPL21P46778 160 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms