RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 RPL6Q02878 288 aaKnown RBP12.75□□□□□ -0.37
HDAC6-219ENST00000476625 SEMA3BQ13214 749 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 ORC1Q13415 861 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 EGFLAMQ63HQ2 1017 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 SLC23A3Q6PIS1 610 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 LRSAM1Q6UWE0 723 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 TMEM25Q86YD3 366 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 MARCH9Q86YJ5 346 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 PNPLA1Q8N8W4 532 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 SCAMP5Q8TAC9 235 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 SPACA7Q96KW9 195 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 GZF1Q9H116 711 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-219ENST00000476625 POLMQ9NP87 494 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-219ENST00000476625 PANK4Q9NVE7 773 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 STK17AQ9UEE5 414 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 CHORDC1Q9UHD1 332 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-219ENST00000476625 CYP8B1Q9UNU6 501 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 KIF3AQ9Y496 699 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 NEUROG3Q9Y4Z2 214 aa12.75□□□□□ -0.37
HDAC6-219ENST00000476625 FRMD3A2A2Y4 597 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 TULP3O75386 442 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 LDHAP00338 332 aaKnown RBP12.74□□□□□ -0.37
HDAC6-219ENST00000476625 TNNC2P02585 160 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 CD59P13987 128 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 GAP43P17677 238 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 PTPN1P18031 435 aaKnown RBP12.74□□□□□ -0.37
HDAC6-219ENST00000476625 MAOBP27338 520 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 CASP4P49662 377 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 CDH8P55286 799 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 NOP14P78316 857 aaKnown RBP12.74□□□□□ -0.37
HDAC6-219ENST00000476625 LMAN2Q12907 356 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 RABEP1Q15276 862 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 EOGTQ5NDL2 527 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 C10orf76Q5T2E6 689 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 PEAR1Q5VY43 1037 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-219ENST00000476625 VSTM1Q6UX27 236 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 TOGARAM2Q6ZUX3 1019 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 SV2BQ7L1I2 683 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 TRAPPC11Q7Z392 1133 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 C11orf74Q86VG3 221 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 ETFBKMTQ8IXQ9 262 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 MINDY1Q8N5J2 469 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 PDILTQ8N807 584 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 ZNF513Q8N8E2 541 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-219ENST00000476625 ZNF516Q92618 1163 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 C8orf48Q96LL4 319 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 SMYD3Q9H7B4 428 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 HSPBP1Q9NZL4 362 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 GMIPQ9P107 970 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 SEL1LQ9UBV2 794 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 MSRB2Q9Y3D2 182 aa12.74□□□□□ -0.37
HDAC6-219ENST00000476625 TP53BP1Q12888 1972 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-219ENST00000476625 CACNA1GO43497 2377 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 IGHV1OR15-9A0A0B4J2B8 117 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 A0A1W2PQF6 199 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 TRIM66O15016 1216 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CLIC2O15247 247 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CAPNS1P04632 268 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 DLATP10515 647 aaKnown RBP12.73□□□□□ -0.37
HDAC6-219ENST00000476625 HOXB2P14652 356 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 NDUFV2P19404 249 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CASP1P29466 404 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 ABCD1P33897 745 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 GNL1P36915 607 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-219ENST00000476625 GRIA2P42262 883 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 MYL6P60660 151 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 ANO4Q32M45 955 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 TDRD10Q5VZ19 366 aaKnown RBP12.73□□□□□ -0.37
HDAC6-219ENST00000476625 SCARA5Q6ZMJ2 495 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 PAQR9Q6ZVX9 377 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 PLEKHO2Q8TD55 490 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 FBXO32Q969P5 355 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CCDC127Q96BQ5 260 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 HSPA12BQ96MM6 686 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 SDCBP2Q9H190 292 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 SNX25Q9H3E2 840 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CAPN10Q9HC96 672 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CD248Q9HCU0 757 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 OLFML3Q9NRN5 406 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 NXF1Q9UBU9 619 aaKnown RBP12.73□□□□□ -0.37
HDAC6-219ENST00000476625 CCDC39Q9UFE4 941 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 PCDHB13Q9Y5F0 798 aa12.73□□□□□ -0.37
HDAC6-219ENST00000476625 A0A0A0MRY4 1105 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 TBC1D3BA6NDS4 549 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 TMEM8BA6NDV4 472 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 WASH3PC4AMC7 463 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 MDM4O15151 490 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 SH3BP5O60239 455 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 BEST1O76090 585 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 TBX18O95935 607 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 ADH1CP00326 375 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 STAT6P42226 847 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 CYP2J2P51589 502 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 ZNF33AQ06730 810 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
HDAC6-219ENST00000476625 BRAPQ7Z569 592 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms