RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 UCMAQ8WVF2 138 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 DNAJC9Q8WXX5 260 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SEC14L1Q92503 715 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 TBC1D10AQ9BXI6 508 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 EDEM3Q9BZQ6 932 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 RNPEPQ9H4A4 650 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MANSC1Q9H8J5 431 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PARVAQ9NVD7 372 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 IRAK4Q9NWZ3 460 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 GRHL1Q9NZI5 618 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 AFG3L2Q9Y4W6 797 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 WASF2Q9Y6W5 498 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ADGRA3Q8IWK6 1321 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MYOCOSA0A1B0GUC4 107 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 AXIN1O15169 862 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MAP3K7O43318 606 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF862O60290 1169 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 FGRP09769 529 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 GNAT1P11488 350 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SP100P23497 879 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CYP3A7P24462 503 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CTGFP29279 349 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 FLT3LGP49771 235 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 LBX1P52954 281 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF200P98182 395 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ASPHQ12797 758 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PGM5Q15124 567 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MTFR1Q15390 333 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SPRYD7Q5W111 196 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 DENND1BQ6P3S1 775 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CATSPER4Q7RTX7 472 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 TMCO2Q7Z6W1 182 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 EDEM1Q92611 657 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 B3GALT6Q96L58 329 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SPATC1LQ9H0A9 340 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 GOLGA2P5Q9HBQ8 144 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SLC12A6Q9UHW9 1150 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ARHGAP26Q9UNA1 814 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 LAMA4Q16363 1823 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 RP1L1Q8IWN7 2480 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ITIH2P19823 946 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 RBL1P28749 1068 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ECHS1P30084 290 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 HNRNPH3P31942 346 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CSE1LP55060 971 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 TPD52P55327 224 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 C1QTNF8P60827 252 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 TRAF1Q13077 416 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 STXBP2Q15833 593 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PPP2R5EQ16537 467 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 EEF1DP3Q658K8 133 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 DSTYKQ6XUX3 929 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 RASSF3Q86WH2 238 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CRLF3Q8IUI8 442 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 FAM156AQ8NDB6 213 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 RXFP2Q8WXD0 754 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PSPC1Q8WXF1 523 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SYN2Q92777 582 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 AZIN2Q96A70 460 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 NAF1Q96HR8 494 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 RBM41Q96IZ5 413 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SEMA6AQ9H2E6 1030 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 AS3MTQ9HBK9 375 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 AGO4Q9HCK5 861 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 NRBP2Q9NSY0 501 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ZNF358Q9NW07 568 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 HMGXB4Q9UGU5 601 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SCOCQ9UIL1 159 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PCDHA2Q9Y5H9 948 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MYH11P35749 1972 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CASP8AP2Q9UKL3 1982 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 BCORQ6W2J9 1755 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PTPRZ1P23471 2315 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 A0A087WZ62 844 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 DFFAO00273 331 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CCL22O00626 93 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 NVLO15381 856 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ADCY3O60266 1144 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CRCPO75575 148 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 SDC4P31431 198 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 BPIFB4P59827 614 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 PRPSAP1Q14558 356 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 DUOXA2Q1HG44 320 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 EFCAB12Q6NXP0 572 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 IZUMO2Q6UXV1 221 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CMC1Q7Z7K0 106 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 NUP93Q8N1F7 819 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MIPOL1Q8TD10 442 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CCHCR1Q8TD31 782 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 ALKBH8Q96BT7 664 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MTBPQ96DY7 904 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CNBD2Q96M20 576 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 FDXACB1Q9BRP7 624 aaPredicted RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 MRPL46Q9H2W6 279 aaKnown RBP5.19□□□□□ -1.58
CCDC39-204ENST00000476379 VCXQ9H320 206 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 CAB39LQ9H9S4 337 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 TBC1D22BQ9NU19 505 aa5.19□□□□□ -1.58
CCDC39-204ENST00000476379 FEM1BQ9UK73 627 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms