RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-208ENST00000475997 LMCD1Q9NZU5 365 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 KCND2Q9NZV8 630 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 CARD8Q9Y2G2 431 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 C15orf41Q9Y2V0 281 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 MYO1GB0I1T2 1018 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 IDH3BO43837 385 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 SHOX2O60902 331 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 KLHL18O94889 574 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 S100A6P06703 90 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 CIITAP33076 1130 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 SLC1A1P43005 524 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 IFI35P80217 286 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ROR1Q01973 937 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 RGS21Q2M5E4 152 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 C1orf186Q6ZWK4 172 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 COL23A1Q86Y22 540 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 CD302Q8IX05 232 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 APPL2Q8NEU8 664 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 RNF139Q8WU17 664 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 EGFL8Q99944 293 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 SMARCAD1Q9H4L7 1026 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 BTBD3Q9Y2F9 522 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 C1orf232A0A0U1RR37 186 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PIPSLA2A3N6 862 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 TMEM150BA6NC51 233 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 GUCY1B2O75343 617 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 VIL1P09327 827 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 THRAP10827 490 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 CALB2P22676 271 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PAX7P23759 505 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 GNL1P36915 607 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 BCAR1P56945 870 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 LGALS3BPQ08380 585 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PDAP1Q13442 181 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 RUNDC3AQ59EK9 446 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PDZK1Q5T2W1 519 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ANKS3Q6ZW76 656 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ENOSF1Q7L5Y1 443 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 SLC47A2Q86VL8 602 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 NUP93Q8N1F7 819 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 VPS37AQ8NEZ2 397 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 MKL1Q969V6 931 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PRRG3Q9BZD7 231 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 RIC8BQ9NVN3 520 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 CACNA2D2Q9NY47 1150 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 GRID1Q9ULK0 1009 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 C4AP0C0L4 1744 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 C4BP0C0L5 1744 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 TRPC5OSA6NMA1 111 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 A8MXQ7 604 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 E5RI56 91 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 KLHL41O60662 606 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ACOT2P49753 483 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 DLG4P78352 724 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PKN2Q16513 984 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ZBTB33Q86T24 672 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 PRPF39Q86UA1 669 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 IFNEQ86WN2 208 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ARHGEF19Q8IW93 802 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 FAM162AQ96A26 154 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 RNFT2Q96EX2 444 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 CDHR1Q96JP9 859 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ZFP42Q96MM3 310 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 FAM193BQ96PV7 902 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 MLPHQ9BV36 600 aaPredicted RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 APOL6Q9BWW8 343 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 TMEM39BQ9GZU3 492 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 TMEM117Q9H0C3 514 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 VPS33BQ9H267 617 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ZWILCHQ9H900 591 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 KRT84Q9NSB2 600 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 KLHL11Q9NVR0 708 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 SLC5A4Q9NY91 659 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 NXF1Q9UBU9 619 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 FAM198AQ9UFP1 575 aa6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 RSL24D1Q9UHA3 163 aaKnown RBP6.32□□□□□ -1.4
HNRNPU-208ENST00000475997 ZNF142P52746 1687 aaPredicted RBP6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 MYH15Q9Y2K3 1946 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 PKD1L3Q7Z443 1732 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 A0A087WXM4 84 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 ATP9AO75110 1047 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 DDHD2O94830 711 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 ARIH2O95376 493 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 SNRPAP09012 282 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 STAT5AP42229 794 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 RPL21P46778 160 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 STAT5BP51692 787 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 KCNK10P57789 538 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 OSTNP61366 133 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 TFAMQ00059 246 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 SPP2Q13103 211 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 CCDC157Q569K6 752 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 TMEM63BQ5T3F8 832 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 TTC27Q6P3X3 843 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 B3GNT6Q6ZMB0 384 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 NOP9Q86U38 636 aaKnown RBP6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 SCUBE1Q8IWY4 988 aa6.31□□□□□ -1.4
HNRNPU-208ENST00000475997 KCTD17Q8N5Z5 321 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms