RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 CACNA2D1P54289 1103 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 MYL6P60660 151 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 GAD2Q05329 585 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 LMAN2Q12907 356 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 BYSLQ13895 437 aaKnown RBP11.51□□□□□ -0.57
CDRT1-205ENST00000475944 SH3PXD2AQ5TCZ1 1133 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 BTBD8Q5XKL5 378 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 NUDT18Q6ZVK8 323 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 UNC13DQ70J99 1090 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 C12orf40Q86WS4 652 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 NELFCDQ8IXH7 590 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 PIGKQ92643 395 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 ZNF396Q96N95 335 aaPredicted RBP11.51□□□□□ -0.57
CDRT1-205ENST00000475944 C7orf25Q9BPX7 421 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 NUSAP1Q9BXS6 441 aaKnown RBP11.51□□□□□ -0.57
CDRT1-205ENST00000475944 B3GNT5Q9BYG0 378 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 DPEP3Q9H4B8 488 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 TMEM30AQ9NV96 361 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 BCCIPQ9P287 314 aaKnown RBP eCLIP11.51□□□□□ -0.57
CDRT1-205ENST00000475944 SH3BP1Q9Y3L3 701 aa11.51□□□□□ -0.57
CDRT1-205ENST00000475944 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
CDRT1-205ENST00000475944 NUP205Q92621 2012 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 ANTXRLA6NF34 631 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 PATE3B3GLJ2 98 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 CDX4O14627 284 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-205ENST00000475944 TNFRSF10BO14763 440 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 GIPC1O14908 333 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 COCHO43405 550 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 CUTAO60888 179 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 CLSTN1O94985 981 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 PROS1P07225 676 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 KIR2DL1P43626 348 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-205ENST00000475944 TUBP50607 506 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 IRX4P78413 519 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 KDSRQ06136 332 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 MESP2Q0VG99 397 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 BIRC3Q13489 604 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 TRIM61Q5EBN2 209 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 SPDYCQ5MJ68 293 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 LY6G5CQ5SRR4 150 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 HECTD3Q5T447 861 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 TRMT11Q7Z4G4 463 aaKnown RBP11.5□□□□□ -0.57
CDRT1-205ENST00000475944 FAM35AQ86V20 835 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 SFTPA1Q8IWL2 248 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 C12orf56Q8IXR9 622 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 PGBD3Q8N328 593 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 HMGB4Q8WW32 186 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 SMARCD1Q96GM5 515 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 TNIP3Q96KP6 325 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 DUSP9Q99956 384 aaKnown RBP11.5□□□□□ -0.57
CDRT1-205ENST00000475944 MED10Q9BTT4 135 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 XYLT2Q9H1B5 865 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 VRTNQ9H8Y1 702 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 DMAP1Q9NPF5 467 aaPredicted RBP11.5□□□□□ -0.57
CDRT1-205ENST00000475944 THADAQ6YHU6 1953 aa11.5□□□□□ -0.57
CDRT1-205ENST00000475944 TCRBV21S2A2A0A5A6 115 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 TBC1D3BA6NDS4 549 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 HOXC11O43248 304 aaPredicted RBP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 EXOC3O60645 756 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 YEATS4O95619 227 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 HNRNPLP14866 589 aaKnown RBP eCLIP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 AP3M2P53677 418 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 SLC5A3P53794 718 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 EHHADHQ08426 723 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 FOXC1Q12948 553 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 KNOP1Q1ED39 458 aaKnown RBP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 BMT2Q1RMZ1 405 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 ZNF699Q32M78 642 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 UAP1L1Q3KQV9 507 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 ZNF667Q5HYK9 610 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 EMC10Q5UCC4 262 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 SNX30Q5VWJ9 437 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 UNQ6494/PRO21346Q6UXR6 183 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 SYT12Q8IV01 421 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 ZNF513Q8N8E2 541 aaPredicted RBP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 GOLGA5Q8TBA6 731 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 KCNV2Q8TDN2 545 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 RLN3Q8WXF3 142 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 ZFRQ96KR1 1074 aaKnown RBP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 KCNK16Q96T55 309 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 NACA2Q9H009 215 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 SMYD3Q9H7B4 428 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 SPHK2Q9NRA0 654 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 FOXD4L1Q9NU39 408 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 COMMD8Q9NX08 183 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 IL37Q9NZH6 218 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 DEC1Q9P2X7 70 aa11.49□□□□□ -0.57
CDRT1-205ENST00000475944 CHORDC1Q9UHD1 332 aaPredicted RBP11.49□□□□□ -0.57
CDRT1-205ENST00000475944 CNOT1A5YKK6 2376 aaKnown RBP11.48□□□□□ -0.57
CDRT1-205ENST00000475944 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 K7ELQ4 463 aaPredicted RBP11.48□□□□□ -0.57
CDRT1-205ENST00000475944 POLR2DO15514 142 aaKnown RBP11.48□□□□□ -0.57
CDRT1-205ENST00000475944 AP5Z1O43299 807 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 ADAM23O75077 832 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 AP1G2O75843 785 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 P4HA1P13674 534 aa11.48□□□□□ -0.57
CDRT1-205ENST00000475944 HOXD12P35452 270 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms