RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 NT5C1BQ96P26 610 aa17.5■□□□□ 0.39
VPS8-222ENST00000475580 EBF3Q9H4W6 596 aa17.5■□□□□ 0.39
VPS8-222ENST00000475580 PNPLA8Q9NP80 782 aa17.5■□□□□ 0.39
VPS8-222ENST00000475580 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.5■□□□□ 0.39
VPS8-222ENST00000475580 LEFTY2O00292 366 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 COCHO43405 550 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 FGFR1OPO95684 399 aaKnown RBP17.49■□□□□ 0.39
VPS8-222ENST00000475580 CHRNB1P11230 501 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 MAGEA9P43362 315 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 RPS9P46781 194 aaKnown RBP17.49■□□□□ 0.39
VPS8-222ENST00000475580 RUNX3Q13761 415 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 PDGFRLQ15198 375 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 TTC30AQ86WT1 665 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 C1orf210Q8IVY1 113 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 EHBP1Q8NDI1 1231 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 ZFRQ96KR1 1074 aaKnown RBP17.49■□□□□ 0.39
VPS8-222ENST00000475580 IRF2BPLQ9H1B7 796 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 CCSER2Q9H7U1 834 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 OSER1Q9NX31 292 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 CPQQ9Y646 472 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 WNT6Q9Y6F9 365 aa17.49■□□□□ 0.39
VPS8-222ENST00000475580 CYP26A1O43174 497 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 TUBP50607 506 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 KIF11P52732 1056 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 YWHAEP62258 255 aaKnown RBP17.48■□□□□ 0.39
VPS8-222ENST00000475580 EML3Q32P44 896 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 CC2D1AQ6P1N0 951 aaPredicted RBP17.48■□□□□ 0.39
VPS8-222ENST00000475580 RBM43Q6ZSC3 357 aaKnown RBP17.48■□□□□ 0.39
VPS8-222ENST00000475580 PPM1KQ8N3J5 372 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 TTC16Q8NEE8 873 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 ATOH1Q92858 354 aaPredicted RBP17.48■□□□□ 0.39
VPS8-222ENST00000475580 DNAI2Q9GZS0 605 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 INTS2Q9H0H0 1204 aaKnown RBP17.48■□□□□ 0.39
VPS8-222ENST00000475580 LINC00597Q9H2U6 94 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 FBXO44Q9H4M3 255 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 NMUR1Q9HB89 426 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 DUS2Q9NX74 493 aaKnown RBP17.48■□□□□ 0.39
VPS8-222ENST00000475580 SMPD4Q9NXE4 827 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 SCML2Q9UQR0 700 aa17.48■□□□□ 0.39
VPS8-222ENST00000475580 RNF225M0QZC1 329 aaPredicted RBP17.47■□□□□ 0.39
VPS8-222ENST00000475580 NCAM2O15394 837 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 ERCC5P28715 1186 aaPredicted RBP17.47■□□□□ 0.39
VPS8-222ENST00000475580 CETN1Q12798 172 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 HECTD3Q5T447 861 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 C1orf228Q6PIY5 440 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 TMEM270Q6UE05 265 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 RRAGAQ7L523 313 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 ANKRD52Q8NB46 1076 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 KREMEN1Q96MU8 473 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 ZSWIM1Q9BR11 485 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 UBXN6Q9BZV1 441 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 CHRDQ9H2X0 955 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 ECT2Q9H8V3 914 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 LMAN1LQ9HAT1 526 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 TSPAN16Q9UKR8 245 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 USP3Q9Y6I4 520 aa17.47■□□□□ 0.39
VPS8-222ENST00000475580 TULP2O00295 520 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 O00370 1275 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 MBL2P11226 248 aaPredicted RBP17.46■□□□□ 0.39
VPS8-222ENST00000475580 HOXD11P31277 338 aaPredicted RBP17.46■□□□□ 0.39
VPS8-222ENST00000475580 ZNF132P52740 706 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 GCNT1Q02742 428 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 GAS6Q14393 721 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 PON2Q15165 354 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 GOLGA7BQ2TAP0 167 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 SGO2Q562F6 1265 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 RAB41Q5JT25 222 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 NAIF1Q69YI7 327 aaPredicted RBP17.46■□□□□ 0.39
VPS8-222ENST00000475580 SCD5Q86SK9 330 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 PIGZQ86VD9 579 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 KIAA1958Q8N8K9 716 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 TFAP2BQ92481 460 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 WBP2Q969T9 261 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 TLR8Q9NR97 1041 aaKnown RBP17.46■□□□□ 0.39
VPS8-222ENST00000475580 RBM12Q9NTZ6 932 aaKnown RBP17.46■□□□□ 0.39
VPS8-222ENST00000475580 SPATA6Q9NWH7 488 aaPredicted RBP17.46■□□□□ 0.39
VPS8-222ENST00000475580 CFAP97Q9P2B7 532 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 PCDHB4Q9Y5E5 795 aa17.46■□□□□ 0.39
VPS8-222ENST00000475580 A0A1W2PQH9 124 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 SCAMP3O14828 347 aaKnown RBP17.45■□□□□ 0.38
VPS8-222ENST00000475580 TLR5O60602 858 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 TBX18O95935 607 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 CALCAP01258 141 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 PAEPP09466 180 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 VDRP11473 427 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 CD19P15391 556 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 GJA4P35212 333 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 NBL1P41271 181 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 IFNAR2P48551 515 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 MTAPQ13126 283 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 CCINQ13939 588 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 PKDCCQ504Y2 493 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 CCDC186Q7Z3E2 898 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 ATP2A3Q93084 1043 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 THAP9Q9H5L6 903 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 CYLDQ9NQC7 956 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
VPS8-222ENST00000475580 TRDMT1O14717 391 aaKnown RBP17.44■□□□□ 0.38
VPS8-222ENST00000475580 SP9P0CG40 484 aa17.44■□□□□ 0.38
VPS8-222ENST00000475580 BCAT1P54687 386 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms