RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 GALK1P51570 392 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 CACNA2D1P54289 1103 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 ZXDBP98169 803 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 LRRC32Q14392 662 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 PPP2R5DQ14738 602 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 MDH1BQ5I0G3 518 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 C1orf220Q5T0J3 134 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 NAIF1Q69YI7 327 aaPredicted RBP12.58□□□□□ -0.4
CLIP2-204ENST00000474962 HEATR6Q6AI08 1181 aaKnown RBP12.58□□□□□ -0.4
CLIP2-204ENST00000474962 CC2D1AQ6P1N0 951 aaPredicted RBP12.58□□□□□ -0.4
CLIP2-204ENST00000474962 PKN3Q6P5Z2 889 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 SPATA17Q96L03 361 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 EPC1Q9H2F5 836 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 CBX8Q9HC52 389 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 TMEM30AQ9NV96 361 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 GCNT4Q9P109 453 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 NCDNQ9UBB6 729 aa12.58□□□□□ -0.4
CLIP2-204ENST00000474962 TRAV19A0A0A6YYK7 116 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 F8VP50 259 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 K7ESF4 209 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 CLDN5O00501 218 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 TACC1O75410 805 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 CKMP06732 381 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 FAM163BP0C2L3 166 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 USP17L7P0C7H9 530 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 TRIM21P19474 475 aaKnown RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF445P59923 1031 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 MCCD1P59942 119 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 SRSF5Q13243 272 aaKnown RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF268Q14587 947 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 MAPRE1Q15691 268 aaKnown RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 FILIP1LQ4L180 1135 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 TMEM196Q5HYL7 178 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 FKBP15Q5T1M5 1219 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 CDKAL1Q5VV42 579 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 FSTL4Q6MZW2 842 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 VSTM1Q6UX27 236 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 IRF2BP1Q8IU81 584 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 DHX40Q8IX18 779 aaKnown RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 TAS1R2Q8TE23 839 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 IER2Q9BTL4 223 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 B3GNT5Q9BYG0 378 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 DNAI2Q9GZS0 605 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 RNF38Q9H0F5 515 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 NDST4Q9H3R1 872 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 POLR3BQ9NW08 1133 aaPredicted RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 DUS2Q9NX74 493 aaKnown RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 SMG5Q9UPR3 1016 aaKnown RBP12.57□□□□□ -0.4
CLIP2-204ENST00000474962 SDK1Q7Z5N4 2213 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 ATG2BQ96BY7 2078 aa12.57□□□□□ -0.4
CLIP2-204ENST00000474962 A8MXQ7 604 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 TRDMT1O14717 391 aaKnown RBP12.56□□□□□ -0.4
CLIP2-204ENST00000474962 VNN1O95497 513 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 STAU1O95793 577 aaKnown RBP12.56□□□□□ -0.4
CLIP2-204ENST00000474962 EGFP01133 1207 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 TGM1P22735 817 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 GRSF1Q12849 480 aaKnown RBP eCLIP12.56□□□□□ -0.4
CLIP2-204ENST00000474962 MTF1Q14872 753 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 NCAPHQ15003 741 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 IQCB1Q15051 598 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 KRT31Q15323 416 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 CBWD6Q4V339 395 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 CBWD3Q5JTY5 395 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 CBWD5Q5RIA9 395 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 GBP6Q6ZN66 633 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 DENND5BQ6ZUT9 1274 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 LUZP1Q86V48 1076 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 EHBP1Q8NDI1 1231 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 SH3RF2Q8TEC5 729 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 OSCP1Q8WVF1 389 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF518BQ9C0D4 1074 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 VPS16Q9H269 839 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 SMYD3Q9H7B4 428 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 ECT2Q9H8V3 914 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 KIF9Q9HAQ2 790 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 TAB2Q9NYJ8 693 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 WNT6Q9Y6F9 365 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 DENND4CQ5VZ89 1909 aa12.56□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF638Q14966 1978 aaKnown RBP12.56□□□□□ -0.4
CLIP2-204ENST00000474962 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 KIF26AQ9ULI4 1882 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 ZNF840PA6NDX5 716 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 PMM2O15305 246 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 ABL1P00519 1130 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 ASS1P00966 412 aaKnown RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 SERPINC1P01008 464 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 ANXA13P27216 316 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 GJA4P35212 333 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 PXNP49023 591 aaPredicted RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 COPB1P53618 953 aaKnown RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 NOP14P78316 857 aaKnown RBP12.55□□□□□ -0.4
CLIP2-204ENST00000474962 FOXK2Q01167 660 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 LRMPQ12912 555 aa12.55□□□□□ -0.4
CLIP2-204ENST00000474962 TAF10Q12962 218 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms