RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 ZSCAN18Q8TBC5 510 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-206ENST00000474828 KHSRPQ92945 711 aaKnown RBP eCLIP17.86■□□□□ 0.454e-6■■■■□ 19.8
SCAF11-206ENST00000474828 RAPGEFL1Q9UHV5 662 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 NUMBLQ9Y6R0 609 aa17.86■□□□□ 0.45
SCAF11-206ENST00000474828 NUP210Q8TEM1 1887 aaPredicted RBP17.86■□□□□ 0.45
SCAF11-206ENST00000474828 PI4K2BG5E9Z4 385 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 SERPINC1P01008 464 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 PNMA6AP0CW24 399 aaPredicted RBP17.85■□□□□ 0.45
SCAF11-206ENST00000474828 CYP11B1P15538 503 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 SSTR3P32745 418 aaPredicted RBP17.85■□□□□ 0.45
SCAF11-206ENST00000474828 SOX5P35711 763 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 PSEN1P49768 467 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 UBASH3AP57075 661 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 SLC7A9P82251 487 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 FCHO2Q0JRZ9 810 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 TDGQ13569 410 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 RAPGEF1Q13905 1077 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 TXNDC8Q6A555 127 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 TANGO2Q6ICL3 276 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 PMF1Q6P1K2 205 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 KLHDC10Q6PID8 442 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 ARID3BQ8IVW6 561 aaPredicted RBP17.85■□□□□ 0.45
SCAF11-206ENST00000474828 UBALD2Q8IYN6 164 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 WDTC1Q8N5D0 677 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 UBA3Q8TBC4 463 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 BAP1Q92560 729 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 SECISBP2LQ93073 1101 aaKnown RBP17.85■□□□□ 0.45
SCAF11-206ENST00000474828 FBXO32Q969P5 355 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 RSPRY1Q96DX4 576 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 RPP25Q9BUL9 199 aaKnown RBP17.85■□□□□ 0.45
SCAF11-206ENST00000474828 C1QTNF1Q9BXJ1 281 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 SLC4A5Q9BY07 1137 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 ANAPC1Q9H1A4 1944 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 CLIC5Q9NZA1 410 aa17.85■□□□□ 0.45
SCAF11-206ENST00000474828 NOCTQ9UK39 431 aaKnown RBP17.85■□□□□ 0.45
SCAF11-206ENST00000474828 ASGR2P07307 311 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 CFHP08603 1231 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 PGFP49763 221 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 PDE6CP51160 858 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 DENND1BQ6P3S1 775 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 SCD5Q86SK9 330 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 TMEM110Q86TL2 294 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 ZNF677Q86XU0 584 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 EPS8L1Q8TE68 723 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 LRRC3BQ96PB8 259 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 SLC22A12Q96S37 553 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 KIF9Q9HAQ2 790 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 ZFP14Q9HCL3 533 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 TRPV5Q9NQA5 729 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 CNGB3Q9NQW8 809 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 SLC2A4RGQ9NR83 387 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 CYTH4Q9UIA0 394 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 ARHGAP26Q9UNA1 814 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 DUSP12Q9UNI6 340 aa17.84■□□□□ 0.45
SCAF11-206ENST00000474828 ITIH6Q6UXX5 1313 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 A0A1W2PQJ5 194 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 C2orf78A6NCI8 922 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 M0QYV0 167 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 THAP12O43422 761 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 DCXO43602 365 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 PRAMEF12O95522 483 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 STAT1P42224 750 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 TKTL1P51854 596 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 SARM1Q6SZW1 724 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 MFSD6LQ8IWD5 586 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 MAB21L3Q8N8X9 362 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 DEPDC1BQ8WUY9 529 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 RSAD2Q8WXG1 361 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 IRGQQ8WZA9 623 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.44
SCAF11-206ENST00000474828 IQCDQ96DY2 449 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 PLA2G2FQ9BZM2 168 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 NMUR1Q9HB89 426 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 NLRC4Q9NPP4 1024 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 TLR8Q9NR97 1041 aaKnown RBP17.83■□□□□ 0.44
SCAF11-206ENST00000474828 OSER1Q9NX31 292 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 GMIPQ9P107 970 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 CHORDC1Q9UHD1 332 aaPredicted RBP17.83■□□□□ 0.44
SCAF11-206ENST00000474828 MUTYHQ9UIF7 546 aa17.83■□□□□ 0.44
SCAF11-206ENST00000474828 KIF26AQ9ULI4 1882 aaPredicted RBP17.83■□□□□ 0.44
SCAF11-206ENST00000474828 TRAV19A0A0A6YYK7 116 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 ARNTLO00327 626 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 ZBED1O96006 694 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 USP17L7P0C7H9 530 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 SRFP11831 508 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 ALADP13716 330 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 USP8P40818 1118 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 ZXDAP98168 799 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 VITQ6UXI7 678 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 BEND5Q7L4P6 421 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 IRF2BP2Q7Z5L9 587 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 NOP9Q86U38 636 aaKnown RBP17.82■□□□□ 0.44
SCAF11-206ENST00000474828 FMNL3Q8IVF7 1028 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 CELF5Q8N6W0 485 aaKnown RBP17.82■□□□□ 0.44
SCAF11-206ENST00000474828 EDAQ92838 391 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 ZFRQ96KR1 1074 aaKnown RBP17.82■□□□□ 0.44
SCAF11-206ENST00000474828 SYT11Q9BT88 431 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 NUP58Q9BVL2 599 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 RNF38Q9H0F5 515 aa17.82■□□□□ 0.44
SCAF11-206ENST00000474828 TDP1Q9NUW8 608 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms