RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CYTH4Q9UIA0 394 aa7.4□□□□□ -1.22
LIMD1-204ENST00000474665 NOCTQ9UK39 431 aaKnown RBP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.4□□□□□ -1.22
LIMD1-204ENST00000474665 MYO16Q9Y6X6 1858 aa7.4□□□□□ -1.23
LIMD1-204ENST00000474665 ASH1LQ9NR48 2969 aaKnown RBP7.4□□□□□ -1.23
LIMD1-204ENST00000474665 ITIH6Q6UXX5 1313 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 FSD2A1L4K1 749 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 AP1G2O75843 785 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 GFPT2O94808 682 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 MICAL2O94851 1124 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 GYPCP04921 128 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 TPM2P07951 284 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 VDRP11473 427 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 CD19P15391 556 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 CYP11B1P15538 503 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 RFX1P22670 979 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 ELF1P32519 619 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SOX5P35711 763 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 USP8P40818 1118 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 TUFMP49411 452 aaKnown RBP7.39□□□□□ -1.23
LIMD1-204ENST00000474665 ZNF75DP51815 510 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 MAP3K7CLP57077 242 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 TPM4P67936 248 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 ITIH3Q06033 890 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 PDE4CQ08493 712 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 GOLGA8FQ08AF8 430 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 GOLGA8DPQ0D2H9 430 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 TBX2Q13207 712 aaPredicted RBP7.39□□□□□ -1.23
LIMD1-204ENST00000474665 GOLGA7BQ2TAP0 167 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 FILIP1LQ4L180 1135 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SGO2Q562F6 1265 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 FIGNQ5HY92 759 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 PRSS36Q5K4E3 855 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SMYD5Q6GMV2 418 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 DENND1BQ6P3S1 775 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 C4orf50Q6ZRC1 276 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 BHLHA9Q7RTU4 235 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 GRASPQ7Z6J2 395 aaPredicted RBP7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SCN4BQ8IWT1 228 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 ANKRD52Q8NB46 1076 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 NEK11Q8NG66 645 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 ITFG1Q8TB96 612 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 UBA3Q8TBC4 463 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 EPS8L1Q8TE68 723 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SLC35F5Q8WV83 523 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 PSMG2Q969U7 264 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SMARCD1Q96GM5 515 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SPATA17Q96L03 361 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 FAM81BQ96LP2 452 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 MYRFLQ96LU7 910 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 PCDHB18PQ96TA0 734 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 TTLL2Q9BWV7 592 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 WDR6Q9NNW5 1121 aaKnown RBP7.39□□□□□ -1.23
LIMD1-204ENST00000474665 PARD6AQ9NPB6 346 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 AVENQ9NQS1 362 aaPredicted RBP7.39□□□□□ -1.23
LIMD1-204ENST00000474665 TSPAN16Q9UKR8 245 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 FBXL21Q9UKT6 434 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 KIAA1257Q9ULG3 409 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 SPEGQ15772 3267 aa7.39□□□□□ -1.23
LIMD1-204ENST00000474665 A0A1W2PQJ5 194 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 FAM92AA1XBS5 289 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 LRRC53A6NM62 1247 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 SLC38A8A6NNN8 435 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 SLC30A4O14863 429 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 LRG1P02750 347 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 F11P03951 625 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 DCNP07585 359 aaKnown RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 RHOP08100 348 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 FAM200BP0CF97 657 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 GJA1P17302 382 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 TRIM21P19474 475 aaKnown RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 GNA15P30679 374 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 GRIK1P39086 918 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 GPD2P43304 727 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 ALDH1A3P47895 512 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 RPL34P49207 117 aaKnown RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 KIF11P52732 1056 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 EPHB3P54753 998 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 RPL10AP62906 217 aaKnown RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 SHC2P98077 582 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 RAB41Q5JT25 222 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 STXBP5Q5T5C0 1151 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 HGSNATQ68CP4 663 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 PMF1Q6P1K2 205 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 PIGZQ86VD9 579 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 SHKBP1Q8TBC3 707 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 SECISBP2LQ93073 1101 aaKnown RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 PCMTD1Q96MG8 357 aaPredicted RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 ZSWIM3Q96MP5 696 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 MYADMQ96S97 322 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 CORO1BQ9BR76 489 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 MED10Q9BTT4 135 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 EDEM3Q9BZQ6 932 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 DMAP1Q9NPF5 467 aaPredicted RBP7.38□□□□□ -1.23
LIMD1-204ENST00000474665 AIPL1Q9NZN9 384 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 TJP2Q9UDY2 1190 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 DPP7Q9UHL4 492 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 CAPN11Q9UMQ6 739 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 PCDHGC3Q9UN70 934 aa7.38□□□□□ -1.23
LIMD1-204ENST00000474665 DAAM1Q9Y4D1 1078 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms