RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 STAT6P42226 847 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 PTGER3P43115 390 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 SNRPFP62306 86 aaKnown RBP12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 MESP2Q0VG99 397 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 SEMA3BQ13214 749 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 DUOXA1Q1HG43 343 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 SLC36A4Q6YBV0 504 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 HS2ST1Q7LGA3 356 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 TRMT11Q7Z4G4 463 aaKnown RBP12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 RABEPKQ7Z6M1 372 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 TTC30AQ86WT1 665 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 CBWD2Q8IUF1 395 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 NUP93Q8N1F7 819 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 PHTF2Q8N3S3 785 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 DEFB124Q8NES8 71 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 OR6B3Q8NGW1 331 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 FGFBP2Q9BYJ0 223 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 ELOVL4Q9GZR5 314 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 COMMD8Q9NX08 183 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 IL37Q9NZH6 218 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 HSPBP1Q9NZL4 362 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 BCCIPQ9P287 314 aaKnown RBP eCLIP12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 CFAP97Q9P2B7 532 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 SLC6A14Q9UN76 642 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 MSRB2Q9Y3D2 182 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 BAHCC1Q9P281 2608 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 PTPRJQ12913 1337 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 KNL1Q8NG31 2342 aa12.26□□□□□ -0.45
EXOSC1-207ENST00000474309 TBC1D3BA6NDS4 549 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 H0Y626 953 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 EIF3DO15371 548 aaKnown RBP eCLIP12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 HOXC11O43248 304 aaPredicted RBP12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 TRIM16O95361 564 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 TOP3BO95985 862 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 SERPINF2P08697 491 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 SPINK2P20155 84 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 TUBP50607 506 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 HNRNPDQ14103 355 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 SLC39A14Q15043 492 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 LY6G5CQ5SRR4 150 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 LYSMD4Q5XG99 296 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 BTBD8Q5XKL5 378 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 C12orf40Q86WS4 652 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 SFTPA1Q8IWL2 248 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 ETFBKMTQ8IXQ9 262 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 ZNF507Q8TCN5 953 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 HMGB4Q8WW32 186 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 MRPL45Q9BRJ2 306 aaKnown RBP12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 PANK2Q9BZ23 570 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 SMPD4Q9NXE4 827 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 STARD13Q9Y3M8 1113 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 KNTC1P50748 2209 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 ZFYVE26Q68DK2 2539 aa12.25□□□□□ -0.45
EXOSC1-207ENST00000474309 TCRBV21S2A2A0A5A6 115 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 SRRM3A6NNA2 597 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 A8MXQ7 604 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 TNNI1P19237 187 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 ATICP31939 592 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 MYH10P35580 1976 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 TNNC1P63316 161 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 AMPD3Q01432 767 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 CUL4AQ13619 759 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 PSMD6Q15008 389 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 WDR72Q3MJ13 1102 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 HECTD3Q5T447 861 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 CNNM4Q6P4Q7 775 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 PGBD3Q8N328 593 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 HDDC3Q8N4P3 179 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 FRMD1Q8N878 549 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 FBXO32Q969P5 355 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 ZFRQ96KR1 1074 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 CGRRF1Q99675 332 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 B3GNT5Q9BYG0 378 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 TNMDQ9H2S6 317 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 CAPN10Q9HC96 672 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 SPHK2Q9NRA0 654 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 TMEM30AQ9NV96 361 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 KBTBD4Q9NVX7 518 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 ADAMTS9Q9P2N4 1935 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 DEC1Q9P2X7 70 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 CHORDC1Q9UHD1 332 aaPredicted RBP12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 SH3BP1Q9Y3L3 701 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 NME7Q9Y5B8 376 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 CABIN1Q9Y6J0 2220 aa12.24□□□□□ -0.45
EXOSC1-207ENST00000474309 A0A087X0B3 334 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 FAM92AA1XBS5 289 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 VPS37CA5D8V6 355 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 ZBTB24O43167 697 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 COCHO43405 550 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 OPHN1O60890 802 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 ZNF217O75362 1048 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 TULP3O75386 442 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 ZDHHC11BP0C7U3 371 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 ITPKAP23677 461 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 NTSR1P30989 418 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 HOXD13P35453 343 aa12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 ATXN3P54252 364 aaPredicted RBP12.23□□□□□ -0.45
EXOSC1-207ENST00000474309 CACNA2D1P54289 1103 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms