RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 POMPQ9Y244 141 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 SF3B1O75533 1304 aaKnown RBP eCLIP19.36■□□□□ 0.698e-6■■■■■ 107
ECHDC1-214ENST00000474289 BTAF1O14981 1849 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 TMEM150BA6NC51 233 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 TMEM191CA6NGB0 347 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 MAGEB3O15480 346 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 CSDE1O75534 798 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 PROCP04070 461 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 TMEM191BP0C7N4 346 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 ATP6V1B1P15313 513 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 BTKQ06187 659 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 DCTN2Q13561 401 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 DENND5BQ6ZUT9 1274 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 CEP70Q8NHQ1 597 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 SNRNP27Q8WVK2 155 aaKnown RBP19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 SLC13A1Q9BZW2 595 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 SENP6Q9GZR1 1112 aaPredicted RBP19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 CYP4F11Q9HBI6 524 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 PKD2L1Q9P0L9 805 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 SORCS3Q9UPU3 1222 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 DTNAQ9Y4J8 743 aa19.36■□□□□ 0.69
ECHDC1-214ENST00000474289 DENRO43583 198 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 ZC3H11AO75152 810 aaKnown RBP eCLIP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 BBOX1O75936 387 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 COPAP53621 1224 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 YWHAGP61981 247 aaKnown RBP eCLIP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 BASP1P80723 227 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 C1QBPQ07021 282 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 WASHC5Q12768 1159 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TCHHL1Q5QJ38 904 aaPredicted RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 OGFRL1Q5TC84 451 aaPredicted RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TTC39BQ5VTQ0 682 aaPredicted RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 PLA2G4FQ68DD2 849 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TRIM72Q6ZMU5 477 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 DIS3LQ8TF46 1054 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 GMCL1Q96IK5 515 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 PICK1Q9NRD5 415 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TBX20Q9UMR3 447 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TELO2Q9Y4R8 837 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 A0A0B4J269 797 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 DNAJA2O60884 412 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 WEE2P0C1S8 567 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 GNA15P30679 374 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 IRX4P78413 519 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 OGDHQ02218 1023 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TUBB3Q13509 450 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 ZYXQ15942 572 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 AOC3Q16853 763 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 SPOPLQ6IQ16 392 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 ZCCHC23Q6ZST2 131 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 ZNF554Q86TJ5 538 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 SLC26A11Q86WA9 606 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 HPS6Q86YV9 775 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 TTC13Q8NBP0 860 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 ACTRT2Q8TDY3 377 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 RSAD2Q8WXG1 361 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 PPP1R14BQ96C90 147 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 ZFRQ96KR1 1074 aaKnown RBP19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 FBXL18Q96ME1 805 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 MCEEQ96PE7 176 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 SIPA1L1O43166 1804 aa19.35■□□□□ 0.69
ECHDC1-214ENST00000474289 HSP90AA5PQ58FG0 334 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 LMBRD2Q68DH5 695 aaPredicted RBP19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 PAOXQ6QHF9 649 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 TRMT1LQ7Z2T5 733 aaKnown RBP19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 MIER3Q7Z3K6 550 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 JDP2Q8WYK2 163 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 DCUN1D1Q96GG9 259 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 MRPS26Q9BYN8 205 aaKnown RBP19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 SHCBP1LQ9BZQ2 653 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 BTBD7Q9P203 1132 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 PRR12Q9ULL5 1215 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 SERPINB2P05120 415 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 YY1P25490 414 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 SLC5A2P31639 672 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 ALDH1A3P47895 512 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 NRLP54845 237 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 JAG1P78504 1218 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 SH3D19Q5HYK7 790 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 SLC39A4Q6P5W5 647 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 USP37Q86T82 979 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 MAP4K3Q8IVH8 894 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 UNC45BQ8IWX7 931 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 CTAGE3PQ8IX95 158 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 EFCAB3Q8N7B9 438 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 PPM1NQ8N819 430 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 TEKT1Q969V4 418 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 EXOC7Q9UPT5 735 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 TEX264Q9Y6I9 313 aa19.34■□□□□ 0.69
ECHDC1-214ENST00000474289 C1QAP02745 245 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 P4HBP07237 508 aaKnown RBP19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 ACO1P21399 889 aaKnown RBP19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 PLOD1Q02809 727 aaPredicted RBP19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 SYCP2LQ5T4T6 812 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 TMEM270Q6UE05 265 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 ANO5Q75V66 913 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 SH3BP5LQ7L8J4 393 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 KBTBD6Q86V97 674 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 TMEM161BQ8NDZ6 487 aa19.33■□□□□ 0.69
ECHDC1-214ENST00000474289 GMCL1P1Q8NEA9 526 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms