RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 UCHL3P15374 230 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 PSEN1P49768 467 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 KIF11P52732 1056 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 PLCB2Q00722 1185 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 GPRIN1Q7Z2K8 1008 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 TADA2BQ86TJ2 420 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 TTC30AQ86WT1 665 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 SUGP1Q8IWZ8 645 aaKnown RBP14.49□□□□□ -0.09
USF1-205ENST00000473969 SIX5Q8N196 739 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 NEK11Q8NG66 645 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 TFAP2BQ92481 460 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 SHC3Q92529 594 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 USP13Q92995 863 aaPredicted RBP14.49□□□□□ -0.09
USF1-205ENST00000473969 PDCL3Q9H2J4 239 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 CBX8Q9HC52 389 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 PLCB1Q9NQ66 1216 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 FAM207AQ9NSI2 230 aaPredicted RBP14.49□□□□□ -0.09
USF1-205ENST00000473969 CA14Q9ULX7 337 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.49□□□□□ -0.09
USF1-205ENST00000473969 DOCK8Q8NF50 2099 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 C5orf42Q9H799 3197 aa14.49□□□□□ -0.09
USF1-205ENST00000473969 FAM92AA1XBS5 289 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 PRR33A8MZF0 331 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 FOXN3O00409 490 aaPredicted RBP14.48□□□□□ -0.09
USF1-205ENST00000473969 CHADO15335 359 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 CYP26A1O43174 497 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 PRAMEF12O95522 483 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 ATP1A3P13637 1013 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 KRT9P35527 623 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 PLA2G4AP47712 749 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 TUBP50607 506 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 TKTL1P51854 596 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 DRAP1Q14919 205 aaPredicted RBP14.48□□□□□ -0.09
USF1-205ENST00000473969 SYCP1Q15431 976 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 SNX30Q5VWJ9 437 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 DDX42Q86XP3 938 aaKnown RBP eCLIP14.48□□□□□ -0.09
USF1-205ENST00000473969 ZNF606Q8WXB4 792 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 DNASE1L2Q92874 299 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 SECISBP2LQ93073 1101 aaKnown RBP14.48□□□□□ -0.09
USF1-205ENST00000473969 SPAG5Q96R06 1193 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 CDK5RAP1Q96SZ6 601 aaKnown RBP14.48□□□□□ -0.09
USF1-205ENST00000473969 STK33Q9BYT3 514 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 NAGPAQ9UK23 515 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 ARHGAP26Q9UNA1 814 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 CEP83Q9Y592 693 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
USF1-205ENST00000473969 PTPRDP23468 1912 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 MYO10Q9HD67 2058 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 TLR5O60602 858 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 ZBED1O96006 694 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 OAS1P00973 400 aaKnown RBP14.47□□□□□ -0.09
USF1-205ENST00000473969 CALCAP01258 141 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 ATP5C1P36542 298 aaKnown RBP14.47□□□□□ -0.09
USF1-205ENST00000473969 ACADSBP45954 432 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 KPNA1P52294 538 aaPredicted RBP14.47□□□□□ -0.09
USF1-205ENST00000473969 POLR2FP61218 127 aaKnown RBP14.47□□□□□ -0.09
USF1-205ENST00000473969 GOLGA8FQ08AF8 430 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 GOLGA8DPQ0D2H9 430 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 FCHO2Q0JRZ9 810 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 IQCB1Q15051 598 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 MEA1Q16626 185 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 SLC44A4Q53GD3 710 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 BMP8AQ7Z5Y6 402 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 LUZP1Q86V48 1076 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 FLCNQ8NFG4 579 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 SH3RF2Q8TEC5 729 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 KCTD13Q8WZ19 329 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 GOLGA1Q92805 767 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 ASIC4Q96FT7 647 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 HSFY1Q96LI6 401 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 TSPY26PQ9H489 355 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 ARHGEF3Q9NR81 526 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 ST7Q9NRC1 585 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 CCL26Q9Y258 94 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 CPQQ9Y646 472 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 USP3Q9Y6I4 520 aa14.47□□□□□ -0.09
USF1-205ENST00000473969 A0A1W2PQH9 124 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 ZDHHC11BP0C7U3 371 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 RARGP13631 454 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 LCP1P13796 627 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 IFNAR2P48551 515 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 RGS7P49802 495 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 SNX16P57768 344 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 SLC7A9P82251 487 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 PRKCQQ04759 706 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 ADIGQ0VDE8 80 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 MTF1Q14872 753 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 MLF2Q15773 248 aaPredicted RBP14.46□□□□□ -0.09
USF1-205ENST00000473969 PKDCCQ504Y2 493 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 RAB41Q5JT25 222 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 RSRC2Q7L4I2 434 aaKnown RBP14.46□□□□□ -0.09
USF1-205ENST00000473969 CACNA2D4Q7Z3S7 1137 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 FAM71AQ8IYT1 594 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 SLC35F5Q8WV83 523 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 RSPRY1Q96DX4 576 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 NOX5Q96PH1 765 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 ERGIC2Q96RQ1 377 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 SLC22A12Q96S37 553 aa14.46□□□□□ -0.09
USF1-205ENST00000473969 ULBP1Q9BZM6 244 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms