RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 DNAJB4Q9UDY4 337 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 NEU2Q9Y3R4 380 aa18.85■□□□□ 0.61
VARS2-206ENST00000473916 CST8O60676 142 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 FAM163BP0C2L3 166 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 FAM200BP0CF97 657 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 HSD17B3P37058 310 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 GATMP50440 423 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 DRG2P55039 364 aaKnown RBP18.84■□□□□ 0.61
VARS2-206ENST00000473916 PITX1P78337 314 aaPredicted RBP18.84■□□□□ 0.61
VARS2-206ENST00000473916 FAM189BP81408 668 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 PLCB3Q01970 1234 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 TAZQ16635 292 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 CA9Q16790 459 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 UBAP2Q5T6F2 1119 aaKnown RBP18.84■□□□□ 0.61
VARS2-206ENST00000473916 GLB1LQ6UWU2 654 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 ZDHHC17Q8IUH5 632 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 OR10T2Q8NGX3 314 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 ATL2Q8NHH9 583 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.84■□□□□ 0.61
VARS2-206ENST00000473916 ASIC3Q9UHC3 531 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 M0QZQ0 153 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 INPPL1O15357 1258 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 PRPSAP2O60256 369 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 AP1G2O75843 785 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 CCL5P13501 91 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 IVDP26440 423 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 DHX9Q08211 1270 aaKnown RBP18.84■□□□□ 0.61
VARS2-206ENST00000473916 PTK6Q13882 451 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 HFE2Q6ZVN8 426 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 IQCKQ8N0W5 287 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 MYCBPAPQ8TBZ2 947 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 MYLPFQ96A32 169 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 SCLYQ96I15 445 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 C11orf84Q9BUA3 381 aaPredicted RBP18.84■□□□□ 0.61
VARS2-206ENST00000473916 ACBD3Q9H3P7 528 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 TBC1D13Q9NVG8 400 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 HCSTQ9UBK5 93 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 CDH9Q9ULB4 789 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 VWA8A3KMH1 1905 aa18.84■□□□□ 0.61
VARS2-206ENST00000473916 EOMESO95936 686 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 ZSCAN5DPP0CG00 497 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 ETS1P14921 441 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 ACADSBP45954 432 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 ARSEP51690 589 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 CDH6P55285 790 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 NOMO2Q5JPE7 1267 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 FAM182AQ5T1J6 154 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 LRRTM3Q86VH5 581 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 OR2W6PQ8NHA6 318 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 FAM149B1Q96BN6 582 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 TBCBQ99426 244 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 DNAI2Q9GZS0 605 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 CYLDQ9NQC7 956 aa18.83■□□□□ 0.61
VARS2-206ENST00000473916 TANC1Q9C0D5 1861 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 NRP1O14786 923 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 HSF2BPO75031 334 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 PECAM1P16284 738 aaPredicted RBP18.83■□□□□ 0.6
VARS2-206ENST00000473916 SNX16P57768 344 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 DSC1Q08554 894 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 GPS2Q13227 327 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 BYSLQ13895 437 aaKnown RBP18.83■□□□□ 0.6
VARS2-206ENST00000473916 B4GALNT4Q76KP1 1039 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 RFX6Q8HWS3 928 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 SNRNP25Q9BV90 132 aaKnown RBP18.83■□□□□ 0.6
VARS2-206ENST00000473916 TXLNGYQ9BZA5 131 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 ATP8A1Q9Y2Q0 1164 aa18.83■□□□□ 0.6
VARS2-206ENST00000473916 PRG3Q9Y2Y8 225 aaPredicted RBP18.83■□□□□ 0.6
VARS2-206ENST00000473916 TTC3P53804 2025 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 KRT14P02533 472 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 CYP11A1P05108 521 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 TKTL1P51854 596 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 BCAR1P56945 870 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 OTUD4Q01804 1114 aaKnown RBP18.82■□□□□ 0.6
VARS2-206ENST00000473916 DPYSL3Q14195 570 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 CFAP58Q5T655 872 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 OTUD1Q5VV17 481 aaPredicted RBP18.82■□□□□ 0.6
VARS2-206ENST00000473916 BBS12Q6ZW61 710 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 COLGALT2Q8IYK4 626 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 DEFB106AQ8N104 65 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 ACTL9Q8TC94 416 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 ART4Q93070 314 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 PKMYT1Q99640 499 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 TMEM121Q9BTD3 319 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 LRRC4CQ9HCJ2 640 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 HOMER3Q9NSC5 361 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 VPS18Q9P253 973 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 PLAAQ9Y263 795 aa18.82■□□□□ 0.6
VARS2-206ENST00000473916 ENPP3O14638 875 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 RNF40O75150 1001 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 GAS8O95995 478 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 PCSK1P29120 753 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 PTPN9P43378 593 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 SLC8A3P57103 927 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 MRPS5P82675 430 aaKnown RBP18.81■□□□□ 0.6
VARS2-206ENST00000473916 BFSP2Q13515 415 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 OASLQ15646 514 aaKnown RBP18.81■□□□□ 0.6
VARS2-206ENST00000473916 PLEKHG4Q58EX7 1191 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 HSP90B2PQ58FF3 399 aa18.81■□□□□ 0.6
VARS2-206ENST00000473916 INTS6LQ5JSJ4 861 aaKnown RBP18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms