RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 NEK3P51956 506 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 KCNJ11Q14654 390 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 FAXCQ5TGI0 409 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 IER5Q5VY09 327 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PDIK1LQ8N165 341 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 MCRS1Q96EZ8 462 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 FGD4Q96M96 766 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 FAM111AQ96PZ2 611 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 RAB3IPQ96QF0 476 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PPP1R16BQ96T49 567 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 GPR20Q99678 358 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 LBHD1Q9BQE6 289 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PHACTR1Q9C0D0 580 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 FZD8Q9H461 694 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 ARL8BQ9NVJ2 186 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 INO80B-WBP1J3KQ70 363 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 CILPO75339 1184 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 ENDOD1O94919 500 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 UPP2O95045 317 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 ITGB3P05106 788 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PGK2P07205 417 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 IL4RP24394 825 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PHBP35232 272 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PTPN11Q06124 597 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PTK7Q13308 1070 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 KLHL38Q2WGJ6 581 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 HSF5Q4G112 596 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 DSTYKQ6XUX3 929 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 DPH6Q7L8W6 267 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 DEFB132Q7Z7B7 95 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 CHST13Q8NET6 341 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 MICAL1Q8TDZ2 1067 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 SLC44A1Q8WWI5 657 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 COPS5Q92905 334 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 CADM1Q9BY67 442 aaKnown RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 INO80BQ9C086 356 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 PPCSQ9HAB8 311 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 USP29Q9HBJ7 922 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 CNTN3Q9P232 1028 aa11.42□□□□□ -0.58
C9orf3-214ENST00000473778 CPSF2Q9P2I0 782 aaKnown RBP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.42□□□□□ -0.58
C9orf3-214ENST00000473778 M0QYV0 167 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 ACKR2O00590 384 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 TM9SF1O15321 606 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 UGT1A9O60656 530 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 LPXNO60711 386 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 ATP5HO75947 161 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 DLDP09622 509 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 PYGBP11216 843 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 BGNP21810 368 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 CALB2P22676 271 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 SERPINB3P29508 390 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 ALDH3A1P30838 453 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 POLR2BP30876 1174 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 CDH6P55285 790 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 MBTD1Q05BQ5 628 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 PRKD1Q15139 912 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 NOMO1Q15155 1222 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 RBBP5Q15291 538 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 HADHQ16836 314 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 CDO1Q16878 200 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 ZNF667Q5HYK9 610 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 FAM102AQ5T9C2 384 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 FAM160B1Q5W0V3 765 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 JADE1Q6IE81 842 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 C1orf228Q6PIY5 440 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 TTC13Q8NBP0 860 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 STK32AQ8WU08 396 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 SPDL1Q96EA4 605 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 PTCD3Q96EY7 689 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 ANKRD36BP1Q96IX9 119 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 MECRQ9BV79 373 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 MAGEB5Q9BZ81 275 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 VPS11Q9H270 941 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 SYNCQ9H7C4 482 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 TLE6Q9H808 572 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 UGT1A7Q9HAW7 530 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 UGT1A10Q9HAW8 530 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 UGT1A8Q9HAW9 530 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 SMYD2Q9NRG4 433 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 GPATCH2LQ9NWQ4 482 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 GGA3Q9NZ52 723 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 HEY2Q9UBP5 337 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 BPTFQ12830 3046 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 CFAP69A5D8W1 941 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 LACTBL1A8MY62 500 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 MCF2LO15068 1137 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 SNUPNO95149 360 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 TNNC2P02585 160 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 PFKMP08237 780 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 SCN1AP35498 2009 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 PEX19P40855 299 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 GABRB2P47870 512 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 MXD4Q14582 209 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 KHDC1Q4VXA5 237 aaKnown RBP11.41□□□□□ -0.58
C9orf3-214ENST00000473778 NCAPG2Q86XI2 1143 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 ZBTB8OSQ8IWT0 167 aa11.41□□□□□ -0.58
C9orf3-214ENST00000473778 C12orf29Q8N999 325 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms