RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CISHQ9NSE2 258 aa12.19□□□□□ -0.46
CPNE1-222ENST00000473373 GMIPQ9P107 970 aa12.19□□□□□ -0.46
CPNE1-222ENST00000473373 KIAA1468Q9P260 1216 aa12.19□□□□□ -0.46
CPNE1-222ENST00000473373 HESX1Q9UBX0 185 aa12.19□□□□□ -0.46
CPNE1-222ENST00000473373 SH3BP1Q9Y3L3 701 aa12.19□□□□□ -0.46
CPNE1-222ENST00000473373 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.19□□□□□ -0.46
CPNE1-222ENST00000473373 CPQQ9Y646 472 aa12.19□□□□□ -0.46
CPNE1-222ENST00000473373 ZNF840PA6NDX5 716 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 PPP1R3GB7ZBB8 358 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 LEFTY2O00292 366 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 SLC9A3R1O14745 358 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-222ENST00000473373 NFATC1O95644 943 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 RPS9P46781 194 aaKnown RBP12.18□□□□□ -0.46
CPNE1-222ENST00000473373 CUL2Q13617 745 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 ZNF77Q15935 545 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 DGKKQ5KSL6 1271 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 PPP1R26Q5T8A7 1209 aaPredicted RBP12.18□□□□□ -0.46
CPNE1-222ENST00000473373 OSCP1Q8WVF1 389 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 ATRIPQ8WXE1 791 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 TMEM176AQ96HP8 235 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 TWNKQ96RR1 684 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 HNRNPABQ99729 332 aaKnown RBP12.18□□□□□ -0.46
CPNE1-222ENST00000473373 SMOQ99835 787 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 COMMD8Q9NX08 183 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 CFAP97Q9P2B7 532 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 DACH1Q9UI36 760 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 ARHGAP26Q9UNA1 814 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 PCDHB4Q9Y5E5 795 aa12.18□□□□□ -0.46
CPNE1-222ENST00000473373 FAM186AA6NE01 2351 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 ARNTLO00327 626 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 PES1O00541 588 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 SCAMP3O14828 347 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 BEST1O76090 585 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 SP9P0CG40 484 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 MTIF2P46199 727 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 CCR3P51677 355 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 MLLT6P55198 1093 aaPredicted RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 USP4Q13107 963 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 MTAPQ13126 283 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 SGO2Q562F6 1265 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 TTI2Q6NXR4 508 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 CLEC20AQ6ZU45 233 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 PAQR9Q6ZVX9 377 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 DGLUCYQ7Z3D6 616 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 DCLK2Q8N568 766 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 SLC35C1Q96A29 364 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 FAXDC2Q96IV6 333 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 ARID3AQ99856 593 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 DUSP9Q99956 384 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 IER2Q9BTL4 223 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 SEMA4AQ9H3S1 761 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 ECT2Q9H8V3 914 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 TMEM30AQ9NV96 361 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 GCNT4Q9P109 453 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 DLGAP2Q9P1A6 1054 aa12.17□□□□□ -0.46
CPNE1-222ENST00000473373 LSM7Q9UK45 103 aaKnown RBP12.17□□□□□ -0.46
CPNE1-222ENST00000473373 KIAA1549LQ6ZVL6 1849 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 DCHS1Q96JQ0 3298 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 ZNF292O60281 2723 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 TLR5O60602 858 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 AFPP02771 609 aaKnown RBP12.16□□□□□ -0.46
CPNE1-222ENST00000473373 RALAP11233 206 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 KCNH2Q12809 1159 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 GOLGA7BQ2TAP0 167 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 TXNDC11Q6PKC3 985 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 TMEM270Q6UE05 265 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 RSRC2Q7L4I2 434 aaKnown RBP12.16□□□□□ -0.46
CPNE1-222ENST00000473373 TADA2BQ86TJ2 420 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 CLDN23Q96B33 292 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 CNOT6LQ96LI5 555 aaKnown RBP12.16□□□□□ -0.46
CPNE1-222ENST00000473373 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 FAM83CQ9BQN1 747 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 DUSP16Q9BY84 665 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 RNF38Q9H0F5 515 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 CHRDQ9H2X0 955 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 CLSTN2Q9H4D0 955 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 CCSER2Q9H7U1 834 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 LRRC4Q9HBW1 653 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 HPS4Q9NQG7 708 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 RWDD2AQ9UIY3 292 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 NAGPAQ9UK23 515 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 FBXO4Q9UKT5 387 aa12.16□□□□□ -0.46
CPNE1-222ENST00000473373 GVINP1Q7Z2Y8 2422 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 CYP26A1O43174 497 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 COCHO43405 550 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 ADH1CP00326 375 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 OAS1P00973 400 aaKnown RBP12.15□□□□□ -0.46
CPNE1-222ENST00000473373 KRT5P13647 590 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 BMP6P22004 513 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 ATP5C1P36542 298 aaKnown RBP12.15□□□□□ -0.46
CPNE1-222ENST00000473373 CXCL12P48061 93 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 RAD23BP54727 409 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 NRLP54845 237 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 SLC7A9P82251 487 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 EML3Q32P44 896 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 C10orf120Q5SQS8 335 aa12.15□□□□□ -0.46
CPNE1-222ENST00000473373 BTBD8Q5XKL5 378 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms