RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FAXCQ5TGI0 409 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 TRNP1Q6NT89 227 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 VPS52Q8N1B4 723 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 UBA3Q8TBC4 463 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 MCUR1Q96AQ8 359 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 C12orf42Q96LP6 360 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 TRIM56Q9BRZ2 755 aaKnown RBP22.02■■□□□ 1.12
COL18A1-207ENST00000473212 TUBB6Q9BUF5 446 aa22.02■■□□□ 1.12
COL18A1-207ENST00000473212 PPP1R1BQ9UD71 204 aaPredicted RBP22.02■■□□□ 1.12
COL18A1-207ENST00000473212 RGS17Q9UGC6 210 aaPredicted RBP22.02■■□□□ 1.12
COL18A1-207ENST00000473212 IQCF3P0C7M6 154 aa22.02■■□□□ 1.11
COL18A1-207ENST00000473212 YWHAGP61981 247 aaKnown RBP eCLIP22.02■■□□□ 1.11
COL18A1-207ENST00000473212 ZNF200P98182 395 aaPredicted RBP22.02■■□□□ 1.11
COL18A1-207ENST00000473212 CHSY1Q86X52 802 aa22.02■■□□□ 1.11
COL18A1-207ENST00000473212 KCNN1Q92952 543 aa22.02■■□□□ 1.11
COL18A1-207ENST00000473212 ZNF333Q96JL9 665 aa22.02■■□□□ 1.11
COL18A1-207ENST00000473212 NRBP2Q9NSY0 501 aa22.02■■□□□ 1.11
COL18A1-207ENST00000473212 ENO4A6NNW6 628 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 INO80B-WBP1J3KQ70 363 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 DNAJC6O75061 913 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 INHBAP08476 426 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 VHLP40337 213 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 RFC5P40937 340 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 TAZQ16635 292 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 CDO1Q16878 200 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 C15orf59Q2T9L4 293 aaPredicted RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 DCAF15Q66K64 600 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 PRPF39Q86UA1 669 aaKnown RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 SPATA18Q8TC71 538 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 SLC44A1Q8WWI5 657 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 INO80BQ9C086 356 aaPredicted RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 TAS2R1Q9NYW7 299 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 PPP1R12AO14974 1030 aaPredicted RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 MYL2P10916 166 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 ESRRAP11474 423 aaPredicted RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 POLR2BP30876 1174 aaKnown RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 AP3M2P53677 418 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 IRX1P78414 480 aaPredicted RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 MRPS35P82673 323 aaKnown RBP22.01■■□□□ 1.11
COL18A1-207ENST00000473212 TMEM132AQ24JP5 1023 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 SNX30Q5VWJ9 437 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 SH2D5Q6ZV89 423 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 NRG4Q8WWG1 115 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 ELOVL4Q9GZR5 314 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 ARMCX1Q9P291 453 aa22.01■■□□□ 1.11
COL18A1-207ENST00000473212 EVPLQ92817 2033 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 FAM237BA0A1B0GVD1 139 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 APOC4-APOC2K7ER74 178 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 MCF2LO15068 1137 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 TGDSO95455 350 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 APOC2P02655 101 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 SLC18A2Q05940 514 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 TRPM4Q8TD43 1214 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 WDR60Q8WVS4 1066 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 SYT15Q9BQS2 421 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 GPATCH2LQ9NWQ4 482 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 ANK1P16157 1881 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 E5RJQ4 531 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 CLCN3P51790 818 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 YWHAEP62258 255 aaKnown RBP22■■□□□ 1.11
COL18A1-207ENST00000473212 KLC1Q07866 573 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 CCDC62Q6P9F0 684 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 C1orf228Q6PIY5 440 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 CCDC33Q8N5R6 958 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 C1orf127Q8N9H9 656 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 SLC4A11Q8NBS3 891 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 DTX3LQ8TDB6 740 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 ZNF483Q8TF39 744 aaPredicted RBP22■■□□□ 1.11
COL18A1-207ENST00000473212 KLRG1Q96E93 195 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 PIM2Q9P1W9 311 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 USP18Q9UMW8 372 aa22■■□□□ 1.11
COL18A1-207ENST00000473212 SPDYE5A6NIY4 337 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 CAPN9O14815 690 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 PGK2P07205 417 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 SERPINB4P48594 390 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 CDHR3Q6ZTQ4 885 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 COPS5Q92905 334 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 OXNAD1Q96HP4 312 aaPredicted RBP21.99■■□□□ 1.11
COL18A1-207ENST00000473212 FCHO1O14526 889 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 TSHRP16473 764 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 TMEM154Q6P9G4 183 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 DARS2Q6PI48 645 aaKnown RBP21.99■■□□□ 1.11
COL18A1-207ENST00000473212 ALYREFQ86V81 257 aaKnown RBP21.99■■□□□ 1.11
COL18A1-207ENST00000473212 NMUR2Q9GZQ4 415 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.99■■□□□ 1.11
COL18A1-207ENST00000473212 HOXC10Q9NYD6 342 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 CNTN3Q9P232 1028 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 TEX264Q9Y6I9 313 aa21.99■■□□□ 1.11
COL18A1-207ENST00000473212 M0QYV0 167 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 SMAPO00193 183 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 MICAL2O94851 1124 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 PSMG1O95456 288 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 ITGB3P05106 788 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 CPA2P48052 419 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 KRT72Q14CN4 511 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 ATF7IP2Q5U623 682 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 CYP4V2Q6ZWL3 525 aaPredicted RBP21.98■■□□□ 1.11
COL18A1-207ENST00000473212 DEFB132Q7Z7B7 95 aa21.98■■□□□ 1.11
COL18A1-207ENST00000473212 NCAPG2Q86XI2 1143 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms