RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 CEP135Q66GS9 1140 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 IL31Q6EBC2 164 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 ACOT1Q86TX2 421 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 TMEM174Q8WUU8 243 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 SPATA32Q96LK8 384 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 SDCBP2Q9H190 292 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 TBC1D14Q9P2M4 693 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 FRMD4BQ9Y2L6 1034 aa20.96■□□□□ 0.95
COL9A3-210ENST00000472880 K7EQS6 105 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 COCHO43405 550 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 AP1G2O75843 785 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 KIF20AO95235 890 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 RPN1P04843 607 aaKnown RBP20.95■□□□□ 0.94
COL9A3-210ENST00000472880 TRIM21P19474 475 aaKnown RBP20.95■□□□□ 0.94
COL9A3-210ENST00000472880 PIK3CAP42336 1068 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 ZACNQ401N2 412 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 HECTD3Q5T447 861 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 ADGRG2Q8IZP9 1017 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 SCAMP5Q8TAC9 235 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 TMC2Q8TDI7 906 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 TAF4BQ92750 862 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 CCDC47Q96A33 483 aaKnown RBP20.95■□□□□ 0.94
COL9A3-210ENST00000472880 PNKPQ96T60 521 aa20.95■□□□□ 0.94
COL9A3-210ENST00000472880 E2F8A0AVK6 867 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 CALUO43852 315 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-210ENST00000472880 RHOBTB1O94844 696 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 APODP05090 189 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 ADH5P11766 374 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 CCDC130P13994 396 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 KCNA4P22459 653 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 GBP1P32455 592 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 EIF2DP41214 584 aaKnown RBP20.94■□□□□ 0.94
COL9A3-210ENST00000472880 TUBP50607 506 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 LIMK1P53667 647 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 KRT85P78386 507 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 PAQR9Q6ZVX9 377 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 FUKQ8N0W3 1084 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 DDX1Q92499 740 aaKnown RBP20.94■□□□□ 0.94
COL9A3-210ENST00000472880 NACA2Q9H009 215 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 DUSP15Q9H1R2 295 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-210ENST00000472880 COMMD8Q9NX08 183 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 CHORDC1Q9UHD1 332 aaPredicted RBP20.94■□□□□ 0.94
COL9A3-210ENST00000472880 MMP17Q9ULZ9 603 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 HPSEQ9Y251 543 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 SH3BP1Q9Y3L3 701 aa20.94■□□□□ 0.94
COL9A3-210ENST00000472880 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.93■□□□□ 0.94
COL9A3-210ENST00000472880 TNFRSF10BO14763 440 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 DCLK1O15075 740 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 SYKP43405 635 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 NDST1P52848 882 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 MRPS21P82921 87 aaKnown RBP20.93■□□□□ 0.94
COL9A3-210ENST00000472880 ORC1Q13415 861 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 USP39Q53GS9 565 aaKnown RBP20.93■□□□□ 0.94
COL9A3-210ENST00000472880 PLA2G2CQ5R387 149 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 SNX30Q5VWJ9 437 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 ANO7Q6IWH7 933 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 SV2AQ7L0J3 742 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 C11orf74Q86VG3 221 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 UNC93AQ86WB7 457 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 CCDC33Q8N5R6 958 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 SLC2A14Q8TDB8 520 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 OTUB2Q96DC9 234 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 TPSD1Q9BZJ3 242 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 IMPG2Q9BZV3 1241 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 CCSER2Q9H7U1 834 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 VPS45Q9NRW7 570 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 GMIPQ9P107 970 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 HMGXB4Q9UGU5 601 aa20.93■□□□□ 0.94
COL9A3-210ENST00000472880 IKBKBO14920 756 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 KAT7O95251 611 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 ASS1P00966 412 aaKnown RBP20.92■□□□□ 0.94
COL9A3-210ENST00000472880 ADRB1P08588 477 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 SLC6A11P48066 632 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 KDSRQ06136 332 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 SPOPLQ6IQ16 392 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 RHBDF2Q6PJF5 856 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 C12orf40Q86WS4 652 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 ZFRQ96KR1 1074 aaKnown RBP20.92■□□□□ 0.94
COL9A3-210ENST00000472880 CNOT6LQ96LI5 555 aaKnown RBP20.92■□□□□ 0.94
COL9A3-210ENST00000472880 SMOC1Q9H4F8 434 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 ARHGEF4Q9NR80 690 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 FAM49BQ9NUQ9 324 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 IL37Q9NZH6 218 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 TRAF3IP3Q9Y228 551 aa20.92■□□□□ 0.94
COL9A3-210ENST00000472880 FAM92AA1XBS5 289 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 ALDH1A2O94788 518 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 HLA-DRAP01903 254 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 NR2F2P24468 414 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 ASPAP45381 313 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 VAMP7P51809 220 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 MAP3K7CLP57077 242 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 CREB5Q02930 508 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 GAD2Q05329 585 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 CRY1Q16526 586 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 LY6G5CQ5SRR4 150 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 BTBD8Q5XKL5 378 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 RASSF3Q86WH2 238 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 TTC30AQ86WT1 665 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 CRYBG2Q8N1P7 616 aa20.91■□□□□ 0.94
COL9A3-210ENST00000472880 ALLCQ8N6M5 410 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms